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cg_0.2_sub10_scaffold_803_c

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_803_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=CG_Nitrosp_01
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase id=3843333 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_803_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

363..2300
DNA (1938bp) protein (646aa)
Two component system histidine kinase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHW7_THEYD
two component system histidine kinase Tax=CG_Nitrosp_01
two component system histidine kinase
cg_0.2_sub10_scaffold_803_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2365..2739
DNA (375bp) protein (125aa)
Putative transcriptional regulatory protein ResD n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z9W0_9FIRM
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_803_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2732..4144
DNA (1413bp) protein (471aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WTE4_GEOS8
multi-sensor signal transduction histidine kinase Tax=CG_Nitrosp_01
multi-sensor signal transduction histidine kinase
cg_0.2_sub10_scaffold_803_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

4114..4386
DNA (273bp) protein (91aa)
response regulator receiver sensor signal transduction histidine kinase Tax=CG_Nitrosp_01
Response regulator receiver sensor signal transduction histidine kinase id=1994338 bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
response regulator receiver sensor signal transduction histidine kinase
cg_0.2_sub10_scaffold_803_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

4379..4750
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Geobacter sp. M18 RepID=C6MU11_9DELT id=129379 bin=ACD79 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
response regulator receiver; K11443 two-component system, cell cycle response regulator DivK Tax=CG_Nitrosp_01
response regulator receiver
cg_0.2_sub10_scaffold_803_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

4747..6267
DNA (1521bp) protein (507aa)
response regulator receiver modulated metal dependent phosphohydrolase Tax=CG_Nitrosp_01
Response regulator receiver modulated metal dependent phosphohydrolase id=3809927 bin=GWF2_Geobacter_54_21 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
response regulator receiver modulated metal dependent phosphohydrolase
cg_0.2_sub10_scaffold_803_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6285..6479)
DNA (195bp) protein (65aa)
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein id=2360187 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
cg_0.2_sub10_scaffold_803_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6536..7213)
DNA (678bp) protein (226aa)
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=CG_Nitrosp_01
Phosphatidylserine decarboxylase proenzyme id=3843336 bin=GWF2_Nitrospirae_44_13 species=Denitrovibrio acetiphilus genus=Denitrovibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
phosphatidylserine decarboxylase
cg_0.2_sub10_scaffold_803_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7210..8226)
DNA (1017bp) protein (339aa)
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=CG_Nitrosp_01
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase id=2217436 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cg_0.2_sub10_scaffold_803_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8347..9195
DNA (849bp) protein (283aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3843342 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_803_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9268..9576
DNA (309bp) protein (103aa)
hypothetical protein; K09777 hypothetical protein Tax=CG_Nitrosp_01
UPF0296 protein THEYE_A0405 id=3843345 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_803_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9650..10189
DNA (540bp) protein (180aa)
gmk; guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=CG_Nitrosp_01
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase id=3843348 bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_803_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

10190..10588
DNA (399bp) protein (133aa)
hyaluronan receptor rhamm; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=CG_Nitrosp_01
DNA-directed RNA polymerase subunit omega id=3843351 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hyaluronan receptor rhamm
cg_0.2_sub10_scaffold_803_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

10557..11807
DNA (1251bp) protein (417aa)
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase id=3843354 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_803_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(11767..12348)
DNA (582bp) protein (194aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3843357 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_803_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(12352..12843)
DNA (492bp) protein (164aa)
id=3843362 Tax=CG_Nitrosp_01
id=3843362 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_803_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13020..13748
DNA (729bp) protein (243aa)
RNA methyltransferase, TrmH family, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] Tax=CG_Nitrosp_01
RNA methyltransferase, TrmH family, group 3 id=3843366 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
TrmH family RNA methyltransferase
cg_0.2_sub10_scaffold_803_c_trna_1
unknown

Not on your lists

13917..13989
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_803_c_trna_2
unknown

Not on your lists

13994..14075
DNA (82bp)
transferRNA
cg_0.2_sub10_scaffold_803_c_trna_3
unknown

Not on your lists

14189..14260
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_803_c_trna_4
unknown

Not on your lists

14356..14428
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_803_c_19
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14520..14807
DNA (288bp) protein (96aa)
Elongation factor Tu n=3 Tax=Acidiphilium RepID=EFTU_ACICJ rbh
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source=
tuf; elongation factor Tu
Displaying 23 items

View Taxonomy