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cg_0.2_sub10_scaffold_649_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_649_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

34..603
DNA (570bp) protein (190aa)
Iron-sulfur cluster-binding protein CooF n=3 Tax=Azotobacter vinelandii RepID=C1DJC1_AZOVD
cooF; iron-sulfur cluster-binding protein CooF Tax=CG_Nitrosp_01
cooF; iron-sulfur cluster-binding protein CooF
cg_0.2_sub10_scaffold_649_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

605..2506
DNA (1902bp) protein (634aa)
cooS; carbon-monoxide dehydrogenase, catalytic subunit; K00198 carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.99.2] Tax=CG_Nitrosp_01
Carbon-monoxide dehydrogenase, catalytic subunit n=3 Tax=Azotobacter vinelandii RepID=C1DJC0_AZOVD
cooS; carbon-monoxide dehydrogenase, catalytic subunit
cg_0.2_sub10_scaffold_649_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2509..3723
DNA (1215bp) protein (405aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=3 Tax=Azotobacter vinelandii RepID=C1DJB9_AZOVD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=CG_Nitrosp_01
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
cg_0.2_sub10_scaffold_649_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(3923..4243)
DNA (321bp) protein (107aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Nitrosp_01
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=3930044 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4240..4722)
DNA (483bp) protein (161aa)
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=CG_Nitrosp_01
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase id=3930042 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4777..5349)
DNA (573bp) protein (191aa)
ylbH; rRNA methyltransferase (EC:2.1.1.-) Tax=CG_Nitrosp_01
Methyltransferase id=3930040 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
methyltransferase
cg_0.2_sub10_scaffold_649_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5444..6103)
DNA (660bp) protein (220aa)
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2); K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=CG_Nitrosp_01
purN; phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase id=3930038 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6156..7112)
DNA (957bp) protein (319aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=CG_Nitrosp_01
PpiC-type peptidyl-prolyl cis-trans isomerase, putative id=3930036 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PpiC-type peptidyl-prolyl cis-trans isomerase
cg_0.2_sub10_scaffold_649_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7206..7733)
DNA (528bp) protein (176aa)
Putative uncharacterized protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4722419 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
cg_0.2_sub10_scaffold_649_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8019..8615
DNA (597bp) protein (199aa)
hypothetical protein Tax=CG_Nitrosp_01
Uncharacterized protein id=3930034 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_649_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(8876..9766)
DNA (891bp) protein (297aa)
lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-); K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] Tax=CG_Nitrosp_01
lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase id=3930033 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(9911..11305)
DNA (1395bp) protein (465aa)
microcin-processing peptidase 2; K03568 TldD protein Tax=CG_Nitrosp_01
Peptidase U62 modulator of DNA gyrase id=3930032 bin=GWF2_Nitrospirae_44_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
tldD; zinc protease TldD, putative modulator of DNA gyrase
cg_0.2_sub10_scaffold_649_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11475..12026
DNA (552bp) protein (184aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=1702996 bin=GWB2_Nitrospirae_rel_47_37 species=Leptospirillum sp. Group II '5-way CG' genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
cg_0.2_sub10_scaffold_649_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12217..12513
DNA (297bp) protein (99aa)
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=CG_Nitrosp_01
DNA repair protein radc id=4892427 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
radC; DNA repair protein RadC
cg_0.2_sub10_scaffold_649_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12506..16015
DNA (3510bp) protein (1170aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B43813
N-6 DNA methylase Tax=CG_Nitrosp_01
N-6 DNA methylase
cg_0.2_sub10_scaffold_649_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16383..16580
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVA0_9BACT
Putative uncharacterized protein Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_649_c_17
unknown

Not on your lists

16567..16701
DNA (135bp) protein (45aa)

This feature has no annotations

cg_0.2_sub10_scaffold_649_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16760..16948
DNA (189bp) protein (63aa)
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein id=2167802 bin=GWB2_Nitrospirae_rel_47_37 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cg_0.2_sub10_scaffold_649_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16968..17351
DNA (384bp) protein (128aa)
PilT protein domain-containing protein Tax=CG_Nitrosp_01
PilT protein domain-containing protein id=4871144 bin=GWA2_Deltaproteo_65_63 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
cg_0.2_sub10_scaffold_649_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17440..17751
DNA (312bp) protein (104aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3929971 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_649_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17739..17951
DNA (213bp) protein (71aa)
Putative uncharacterized protein id=3929970 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_649_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17980..18189
DNA (210bp) protein (70aa)
Putative uncharacterized protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3929969 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

18384..19163
DNA (780bp) protein (260aa)
5'-methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=CG_Nitrosp_01
S-methyl-5-thioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase id=3929968 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

19288..20655
DNA (1368bp) protein (456aa)
two component, sigma54 specific, Fis family transcriptional regulator Tax=CG_Nitrosp_01
Two component, sigma54 specific, transcriptional regulator, Fis family id=3929967 bin=GWF2_Nitrospirae_44_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Fis family transcriptional regulator
cg_0.2_sub10_scaffold_649_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20687..21442
DNA (756bp) protein (252aa)
hypothetical protein Tax=CG_Nitrosp_01
Probable transcriptional regulatory protein THEYE_A1868 id=3929966 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_649_c_26
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

21524..22198
DNA (675bp) protein (225aa)
Putative uncharacterized protein id=3929964 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein Tax=GWF2_Nitrospirae_44_13_curated
hypothetical protein
cg_0.2_sub10_scaffold_649_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22195..23670
DNA (1476bp) protein (492aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=C
glmU; UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23)
Bifunctional protein GlmU id=3929962 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

23782..25608
DNA (1827bp) protein (609aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=CG_Nitrosp_01
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] id=3929960 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

25676..27781
DNA (2106bp) protein (702aa)
ATP-dependent DNA helicase PcrA (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Nitrosp_01
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
ATP-dependent DNA helicase PcrA id=3929958 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_649_c_30
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

27778..28056
DNA (279bp) protein (93aa)
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-); K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=CG_Nitrosp_01
gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=3929956 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Displaying items 1-30 of 32 in total

View Taxonomy