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cg_0.2_sub10_scaffold_223_c

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_223_c_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(2..211)
DNA (210bp) protein (70aa)
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
Putative uncharacterized protein id=4282389 bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cg_0.2_sub10_scaffold_223_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(208..459)
DNA (252bp) protein (84aa)
Predicted protein Tax=CG_Nitrosp_01
Predicted protein id=4282392 bin=GWC2_Deltaproteobacteria_42_51 species=Methanosarcina acetivorans genus=Methanosarcina taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cg_0.2_sub10_scaffold_223_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

536..925
DNA (390bp) protein (130aa)
putative response regulator receiver protein; K11443 two-component system, cell cycle response regulator DivK Tax=CG_Nitrosp_01
Putative response regulator receiver protein id=4127349 bin=GWF2_Nitrospirae_44_13 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
chemotaxis protein CheY
cg_0.2_sub10_scaffold_223_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1011..2072
DNA (1062bp) protein (354aa)
response regulator receiver modulated metal dependent phosphohydrolase; K07814 putative two-component system response regulator Tax=CG_Nitrosp_01
Two-component response regulator id=4127351 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response regulator receiver modulated metal dependent phosphohydrolase
cg_0.2_sub10_scaffold_223_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2339..3436
DNA (1098bp) protein (366aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=CG_Nitrosp_01
Glutamate dehydrogenase (NADP) id=4141318 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Glu/Leu/Phe/Val dehydrogenase
cg_0.2_sub10_scaffold_223_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3750..5354)
DNA (1605bp) protein (535aa)
putative pyridine nucleotide-disulfide oxidoreductase family protein Tax=CG_Nitrosp_01
FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=4141325 bin=GWF2_Nitrospirae_44_13 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
putative pyridine nucleotide-disulfide oxidoreductase family protein
cg_0.2_sub10_scaffold_223_c_7
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5548..5997
DNA (450bp) protein (150aa)
Rubrerythrin n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TFF3_HELMI
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:ABZ83052.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATC
cg_0.2_sub10_scaffold_223_c_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6000..6395
DNA (396bp) protein (132aa)
BadM/Rrf2 family transcriptional regulator Tax=GWC2_Nitrospirae_57_9_curated
Transcriptional regulator, BadM/Rrf2 family id=1874232 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
BadM/Rrf2 family transcriptional regulator
cg_0.2_sub10_scaffold_223_c_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6461..7807
DNA (1347bp) protein (449aa)
Cytochrome bd quinol oxidase subunit 1 apoprotein {ECO:0000313|EMBL:ABQ26350.1}; EC=1.10.3.- {ECO:0000313|EMBL:ABQ26350.1};; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulf
Cytochrome bd quinol oxidase subunit 1 apoprotein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3I2_GEOUR
cytochrome bd ubiquinol oxidase subunit I
cg_0.2_sub10_scaffold_223_c_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7809..8837
DNA (1029bp) protein (343aa)
Cytochrome bd menaquinol oxidase, subunit II n=2 Tax=Geobacter metallireducens RepID=Q39UB6_GEOMG
cydB; cytochrome bd menaquinol oxidase, subunit II
Cytochrome bd menaquinol oxidase, subunit II {ECO:0000313|EMBL:ABB32158.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source
cg_0.2_sub10_scaffold_223_c_11
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(8956..9807)
DNA (852bp) protein (284aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=GWF2_Nitrospirae_44_13_curated
2-oxoacid:ferredoxin oxidoreductase subunit beta id=4141327 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
2-oxoglutarate ferredoxin oxidoreductase subunit beta
cg_0.2_sub10_scaffold_223_c_12
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(9808..10251)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G7F3_9DELT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
hypothetical protein
cg_0.2_sub10_scaffold_223_c_13
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(10226..10672)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G745_9DELT
DNA polymerase, beta-like region Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
cg_0.2_sub10_scaffold_223_c_14
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(10807..12396)
DNA (1590bp) protein (530aa)
4Fe-4S binding protein id=4141374 bin=GWF2_Nitrospirae_44_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
(4Fe-4S)-binding protein Tax=GWF2_Nitrospirae_44_13_curated
(4Fe-4S)-binding protein
cg_0.2_sub10_scaffold_223_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(12398..13300)
DNA (903bp) protein (301aa)
cytoplasmic protein Tax=CG_Nitrosp_01
Hypothetical cytosolic protein id=4141376 bin=GWF2_Nitrospirae_44_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cytoplasmic protein
cg_0.2_sub10_scaffold_223_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13315..15126)
DNA (1812bp) protein (604aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=CG_Nitrosp_01
2-oxoglutarate ferredoxin oxidoreductase alpha subunit id=4141378 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
2-oxoglutarate ferredoxin oxidoreductase subuit alpha
cg_0.2_sub10_scaffold_223_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(15293..15766)
DNA (474bp) protein (158aa)
rubrerythrin Tax=CG_Nitrosp_01
Rubrerythrin id=4141380 bin=GWF2_Nitrospirae_44_13 species=uncultured Nitrospirae bacterium MY4-5C genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rubrerythrin
cg_0.2_sub10_scaffold_223_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(15840..16181)
DNA (342bp) protein (114aa)
id=4141384 Tax=CG_Nitrosp_01
id=4141384 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_223_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(16195..17472)
DNA (1278bp) protein (426aa)
PBPb, PAS/Hist_Kin_Sens domain-containing sensor histidine kinase response regulator Tax=CG_Nitrosp_01
Putative two-component sensor kinase id=4141385 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PBPb, PAS/Hist_Kin_Sens domain-containing sensor histidine kinase response regulator
cg_0.2_sub10_scaffold_223_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(17571..17960)
DNA (390bp) protein (130aa)
id=4141387 Tax=CG_Nitrosp_01
id=4141387 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_223_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(17993..18538)
DNA (546bp) protein (182aa)
cupin 2 conserved barrel domain protein Tax=CG_Nitrosp_01
Cupin 2 conserved barrel domain protein id=4141388 bin=GWF2_Nitrospirae_44_13 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cupin 2 barrel domain-containing protein
cg_0.2_sub10_scaffold_223_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(18658..19407)
DNA (750bp) protein (250aa)
Transcriptional regulator, LuxR family n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZZ1_GEODF
LuxR family transcriptional regulator; K07782 LuxR family transcriptional regulator Tax=CG_Nitrosp_01
LuxR family transcriptional regulator
cg_0.2_sub10_scaffold_223_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

19570..20775
DNA (1206bp) protein (402aa)
AstB/ChuR-related protein Tax=CG_Nitrosp_01
AstB/chuR-related protein id=4141400 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
AstB/chuR-like protein
cg_0.2_sub10_scaffold_223_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(20833..22536)
DNA (1704bp) protein (568aa)
ABC transporter; K03688 ubiquinone biosynthesis protein Tax=CG_Nitrosp_01
ABC transporter id=4141404 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ABC transporter
cg_0.2_sub10_scaffold_223_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(22540..22863)
DNA (324bp) protein (108aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4141406 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_223_c_26
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(22918..25566)
DNA (2649bp) protein (883aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Nitrosp_01
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase id=4141408 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_223_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25602..25949)
DNA (348bp) protein (116aa)
lipoprotein Tax=CG_Nitrosp_01
Lipoprotein, putative id=4141410 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
lipoprotein
cg_0.2_sub10_scaffold_223_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25954..26430)
DNA (477bp) protein (159aa)
recX; regulatory protein RecX; K03565 regulatory protein Tax=CG_Nitrosp_01
Regulatory protein RecX id=4141411 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
recX; regulatory protein RecX
cg_0.2_sub10_scaffold_223_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(26483..27628)
DNA (1146bp) protein (382aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_Nitrosp_01
Twitching motility protein id=4141412 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
twitching motility protein
cg_0.2_sub10_scaffold_223_c_30
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(27735..28754)
DNA (1020bp) protein (340aa)
recA; RecA protein; K03553 recombination protein RecA Tax=CG_Nitrosp_01
Protein RecA id=4141413 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
recA; RecA protein
Displaying items 1-30 of 35 in total

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