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cg_0.2_sub10_scaffold_369_c

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_369_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(108..845)
DNA (738bp) protein (246aa)
id=3930453 Tax=CG_Nitrosp_01
id=3930453 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_2
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(1157..2137)
DNA (981bp) protein (327aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=GWF2_Nitrospirae_44_13_curated
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=3930454 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_3
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(2406..3878)
DNA (1473bp) protein (491aa)
histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=GWF2_Nitrospirae_44_13_curated
Putative two-component sensor kinase id=3930455 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
integral membrane sensor hybrid histidine kinase
cg_0.2_sub10_scaffold_369_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

4037..6265
DNA (2229bp) protein (743aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3930456 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_369_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

6265..7212
DNA (948bp) protein (316aa)
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC:2.7.8.-) Tax=CG_Nitrosp_01
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase (EC:2.7.8.-)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase id=3930457 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

7193..8092
DNA (900bp) protein (300aa)
hypothetical protein; K07027 Tax=CG_Nitrosp_01
Membrane protein, putative id=3930458 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_369_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8113..8550
DNA (438bp) protein (146aa)
MOSC domain-containing protein Tax=CG_Nitrosp_01
MOSC domain protein id=3930459 bin=GWF2_Nitrospirae_44_13 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
MOSC domain-containing protein
cg_0.2_sub10_scaffold_369_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8609..9091
DNA (483bp) protein (161aa)
molybdopterin biosynthesis mog protein Tax=CG_Nitrosp_01
Molybdopterin biosynthesis mog protein id=3930460 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
molybdopterin biosynthesis mog protein
cg_0.2_sub10_scaffold_369_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9088..9810
DNA (723bp) protein (241aa)
ccdA; cytochrome c biogenesis protein CcdA; K06196 cytochrome c-type biogenesis protein Tax=CG_Nitrosp_01
Cytochrome c biogenesis protein CcdA id=3930461 bin=GWF2_Nitrospirae_44_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
ccdA; cytochrome c biogenesis protein CcdA
cg_0.2_sub10_scaffold_369_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(9807..10430)
DNA (624bp) protein (208aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Nitrosp_01
Sua5/YciO/YrdC/YwlC family protein id=3930463 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Sua5/YciO/YrdC/YwlC family protein
cg_0.2_sub10_scaffold_369_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10570..11904)
DNA (1335bp) protein (445aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23] Tax=CG_Nitrosp_01
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase id=3604830 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

12071..13351
DNA (1281bp) protein (427aa)
hamp domain/gaf domain/hd domain protein Tax=CG_Nitrosp_01
Hamp domain/gaf domain/hd domain protein id=3930466 bin=GWF2_Nitrospirae_44_13 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hamp domain/gaf domain/hd domain-containing protein
cg_0.2_sub10_scaffold_369_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13415..14230
DNA (816bp) protein (272aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=CG_Nitrosp_01
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A id=3930467 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(14320..14670)
DNA (351bp) protein (117aa)
DnaK suppressor protein; K06204 DnaK suppressor protein Tax=CG_Nitrosp_01
DnaK suppressor protein id=3930468 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DnaK suppressor protein
cg_0.2_sub10_scaffold_369_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(14783..14944)
DNA (162bp) protein (54aa)
id=3930469 Tax=CG_Nitrosp_01
id=3930469 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(15042..15599)
DNA (558bp) protein (186aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=CG_Nitrosp_01
Ribosome-recycling factor id=3930470 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
frr; ribosome recycling factor
cg_0.2_sub10_scaffold_369_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(15568..16314)
DNA (747bp) protein (249aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_Nitrosp_01
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase id=3930471 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(16340..16942)
DNA (603bp) protein (201aa)
tsf; translation elongation factor Ts; K02357 elongation factor Ts Tax=CG_Nitrosp_01
Elongation factor Ts id=3930473 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
tsf; translation elongation factor Ts
cg_0.2_sub10_scaffold_369_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(16939..17715)
DNA (777bp) protein (259aa)
rpsB; ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Nitrosp_01
30S ribosomal protein S2 id=3930543 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
rpsB; 30S ribosomal protein S2
cg_0.2_sub10_scaffold_369_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(17904..18983)
DNA (1080bp) protein (360aa)
permease, YjgP/YjgQ family; K11720 lipopolysaccharide export system permease protein Tax=CG_Nitrosp_01
Putative permease, YjgP/YjgQ family id=3930638 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
permease, YjgP/YjgQ family
cg_0.2_sub10_scaffold_369_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(18986..20065)
DNA (1080bp) protein (360aa)
permease, YjgP/YjgQ family Tax=CG_Nitrosp_01
Putative permease, YjgP/YjgQ family id=3930640 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
permease, YjgP/YjgQ family
cg_0.2_sub10_scaffold_369_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20190..20753
DNA (564bp) protein (188aa)
folE; GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=CG_Nitrosp_01
folE; GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 id=3930642 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20763..21629
DNA (867bp) protein (289aa)
FolD bifunctional protein (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] Tax=CG_Nitrosp_01
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD id=3930644 bin=GWF2_Nitrospirae_44_13 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_369_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

21690..22010
DNA (321bp) protein (107aa)
carboxymuconolactone decarboxylase Tax=CG_Nitrosp_01
Carboxymuconolactone decarboxylase id=3930651 bin=GWF2_Nitrospirae_44_13 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
carboxymuconolactone decarboxylase
cg_0.2_sub10_scaffold_369_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22274..22492
DNA (219bp) protein (73aa)
Tax=CG_Nitrosp_01
Displaying 25 items

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