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cg_0.2_sub10_scaffold_392_c

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_392_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1..870
DNA (870bp) protein (290aa)
hamp domain/gaf domain/hd domain protein Tax=CG_Nitrosp_01
Hamp domain/gaf domain/hd domain protein id=4044250 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hamp domain/gaf domain/hd domain-containing protein
cg_0.2_sub10_scaffold_392_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

867..1634
DNA (768bp) protein (256aa)
beta-lactamase domain-containing protein Tax=CG_Nitrosp_01
Beta-lactamase domain protein id=4044249 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
beta-lactamase domain-containing protein
cg_0.2_sub10_scaffold_392_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1634..2464
DNA (831bp) protein (277aa)
accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit (EC:6.4.1.2); K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=CG_Nitrosp_01
accD; acetyl-CoA carboxylase, carboxyl transferase subuit beta (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta id=4044248 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_392_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2673..4163
DNA (1491bp) protein (497aa)
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC (EC:6.3.2.17 6.3.2.12) Tax=CG_Nitrosp_01
folC; bifunctional folylpolyglutamate synthase/dihydrofolate synthase protein FolC (EC:6.3.2.17 6.3.2.12)
FolC bifunctional protein id=4044247 bin=GWF2_Nitrospirae_44_13 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_392_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

4160..6274
DNA (2115bp) protein (705aa)
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=CG_Nitrosp_01
Organic solvent tolerance protein id=4044246 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
organic solvent tolerance protein
cg_0.2_sub10_scaffold_392_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

6277..7953
DNA (1677bp) protein (559aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=CG_Nitrosp_01
General secretory pathway protein E id=4044245 bin=GWF2_Nitrospirae_44_13 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
type II secretion system protein E (GspE)
cg_0.2_sub10_scaffold_392_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

7956..9173
DNA (1218bp) protein (406aa)
type II secretion system F domain-containing protein; K12278 MSHA biogenesis protein MshG Tax=CG_Nitrosp_01
Bacterial type II secretion system F domain protein id=4044244 bin=GWF2_Nitrospirae_44_13 species=Desulfovibrio sp. A2 genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
type II secretion system F domain-containing protein
cg_0.2_sub10_scaffold_392_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9143..10453
DNA (1311bp) protein (437aa)
Sensory histidine kinase AtoS Tax=CG_Nitrosp_01
Sensory histidine kinase AtoS id=4044243 bin=GWF2_Nitrospirae_44_13 species=Morganella morganii genus=Morganella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Sensory histidine kinase AtoS
cg_0.2_sub10_scaffold_392_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10520..11773)
DNA (1254bp) protein (418aa)
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] Tax=CG_Nitrosp_01
Phospholipase D/Transphosphatidylase id=4044242 bin=GWF2_Nitrospirae_44_13 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
phospholipase D/transphosphatidylase
cg_0.2_sub10_scaffold_392_c_10
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

11863..13242
DNA (1380bp) protein (460aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4044241 bin=GWF2_Nitrospirae_44_13 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=GWF2_Nitrospirae_44_13_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
cg_0.2_sub10_scaffold_392_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13265..13534)
DNA (270bp) protein (90aa)
hypothetical protein; K09888 cell division protein ZapA Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4044240 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_392_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13536..13847)
DNA (312bp) protein (104aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4044239 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_392_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(13891..15972)
DNA (2082bp) protein (694aa)
soluble lytic murein transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=CG_Nitrosp_01
Soluble lytic murein transglycosylase id=4044238 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
soluble lytic murein transglycosylase
cg_0.2_sub10_scaffold_392_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16063..17904
DNA (1842bp) protein (614aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4044166 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_392_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17974..18903
DNA (930bp) protein (310aa)
cysteine synthase (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47] Tax=CG_Nitrosp_01
cysteine synthase (EC:2.5.1.47)
Cysteine synthase id=4044164 bin=GWF2_Nitrospirae_44_13 species=Bacillus methanolicus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_392_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(18957..20066)
DNA (1110bp) protein (370aa)
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=CG_Nitrosp_01
Putative cobalt ABC transporter ATP binding protein id=4044159 bin=GWF2_Nitrospirae_44_13 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cbiO-4; ABC-type cobalt transport system, ATPase component
cg_0.2_sub10_scaffold_392_c_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20074..21000)
DNA (927bp) protein (309aa)
cobalt ABC transporter, permease protein CbiQ Tax=RBG_13_Deltaproteobacteria_43_22_curated
Cobalt ABC transporter, permease protein CbiQ id=1999247 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cobalt ABC transporter, permease protein CbiQ
cg_0.2_sub10_scaffold_392_c_18
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20990..21325)
DNA (336bp) protein (112aa)
cobalamin biosynthesis protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Cobalamin biosynthesis protein id=1999249 bin=GWB2_Nitrospirae_rel_47_37 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cobalamin biosynthesis protein
cg_0.2_sub10_scaffold_392_c_19
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21327..22013)
DNA (687bp) protein (229aa)
cobalamin (vitamin B12) biosynthesis protein CbiM; K02007 cobalt/nickel transport system permease protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Cobalamin (Vitamin B12) biosynthesis CbiM protein id=1999251 bin=GWB2_Nitrospirae_rel_47_37 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
cobalamin (vitamin B12) biosynthesis protein CbiM
cg_0.2_sub10_scaffold_392_c_20
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22014..22664)
DNA (651bp) protein (217aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_43_22_curated
Uncharacterized protein id=2726722 bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Displaying 20 items

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