ggKbase home page

cg_0.2_sub10_scaffold_278_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_278_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(2..127)
DNA (126bp) protein (42aa)
transposase Tax=CG_Nitrosp_01
Putative uncharacterized protein id=2019625 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
cg_0.2_sub10_scaffold_278_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(259..555)
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_Nitrosp_01
TPR repeat-containing protein id=3426453 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_278_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(790..1248)
DNA (459bp) protein (153aa)
Putative disulphide-isomerase Tax=CG_Nitrosp_01
Putative disulphide-isomerase id=3240136 bin=GWF2_Nitrospirae_44_13 species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(1285..2760)
DNA (1476bp) protein (492aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=CG_Nitrosp_01
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase id=3240140 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(2821..5538)
DNA (2718bp) protein (906aa)
calcium-transporting ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] Tax=CG_Nitrosp_01
calcium-transporting ATPase (EC:3.6.3.8)
Calcium-transporting ATPase id=3240144 bin=GWF2_Nitrospirae_44_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5715..6554)
DNA (840bp) protein (280aa)
universal stress protein Tax=CG_Nitrosp_01
Universal stress protein family id=3240148 bin=GWF2_Nitrospirae_44_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
universal stress protein
cg_0.2_sub10_scaffold_278_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6698..6949)
DNA (252bp) protein (84aa)
SirA family protein
SirA family protein Tax=CG_Nitrosp_01
SirA family protein id=3240152 bin=GWF2_Nitrospirae_44_13 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6969..7379)
DNA (411bp) protein (137aa)
id=3240158 Tax=CG_Nitrosp_01
id=3240158 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7381..7740)
DNA (360bp) protein (120aa)
DsrE family protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] Tax=CG_Nitrosp_01
DsrE family protein id=3240160 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DsrE family protein
cg_0.2_sub10_scaffold_278_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7751..8047)
DNA (297bp) protein (99aa)
id=3240165 Tax=CG_Nitrosp_01
id=3240165 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8345..10366
DNA (2022bp) protein (674aa)
uvrB; excinuclease ABC, B subunit; K03702 excinuclease ABC subunit B Tax=CG_Nitrosp_01
UvrABC system protein B id=3240166 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
uvrB; excinuclease ABC subunit B
cg_0.2_sub10_scaffold_278_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10645..11478)
DNA (834bp) protein (278aa)
hypothetical protein; K06889 Tax=CG_Nitrosp_01
Alpha/beta hydrolase fold protein id=3240178 bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_278_c_trna_1
unknown

Not on your lists

11527..11610
DNA (84bp)
transferRNA
cg_0.2_sub10_scaffold_278_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

11867..13588
DNA (1722bp) protein (574aa)
phosphotransferase domain-containing protein; K02347 DNA polymerase (family X) Tax=CG_Nitrosp_01
PHP C-terminal domain protein id=3240183 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
phosphotransferase domain-containing protein
cg_0.2_sub10_scaffold_278_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13712..13933
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037EE874
putative transcription factor, MBF1 like protein Tax=CG_Nitrosp_01
putative transcription factor, MBF1 like protein
cg_0.2_sub10_scaffold_278_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13935..14642
DNA (708bp) protein (236aa)
Putative glycosyl hydrolase n=1 Tax=Dehalococcoides sp. (strain GT) RepID=D3SK75_DEHSG
glycosyl hydrolase Tax=CG_Nitrosp_01
glycosyl hydrolase
cg_0.2_sub10_scaffold_278_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(14662..16272)
DNA (1611bp) protein (537aa)
adenine-specific DNA methylase Tax=CG_Nitrosp_01
PspGI methylase id=3203310 bin=GWC1_Spirochaetes_27_15 species=Pyrococcus sp. GI-H genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
adenine-specific DNA methylase
cg_0.2_sub10_scaffold_278_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16431..16622
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=CG_Nitrosp_01
Uncharacterized protein id=2948271 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
cg_0.2_sub10_scaffold_278_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

16679..18013
DNA (1335bp) protein (445aa)
Zn-dependent protease Tax=CG_Nitrosp_01
Putative Zn-dependent protease, involved in pqq synthesis (PpqF) id=3240191 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Zn-dependent protease
cg_0.2_sub10_scaffold_278_c_19
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

18024..19445
DNA (1422bp) protein (474aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative Peptidase M16 domain protein, involved in ppq synthesis (PpqG) id=3240197 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_278_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

19567..20637
DNA (1071bp) protein (357aa)
DNA polymerase III, subunits gamma and tau; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=CG_Nitrosp_01
DNA polymerase III, subunits gamma and tau id=3240211 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DNA polymerase III subunits gamma and tau
cg_0.2_sub10_scaffold_278_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20721..21629
DNA (909bp) protein (303aa)
Tpl protein Tax=CG_Nitrosp_01
Tpl protein id=3240216 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tpl protein
cg_0.2_sub10_scaffold_278_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


21656..23257
DNA (1602bp) protein (534aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Nitrosp_01
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase id=3240221 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_278_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

23296..24606
DNA (1311bp) protein (437aa)
chlorohydrolase family protein; K12960 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] Tax=CG_Nitrosp_01
5-methylthioadenosine/S-adenosylhomocysteine deaminase id=3240226 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
chlorohydrolase family protein
cg_0.2_sub10_scaffold_278_c_24
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(24626..25045)
DNA (420bp) protein (140aa)
Putative uncharacterized protein id=3240229 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein Tax=GWF2_Nitrospirae_44_13_curated
hypothetical protein
cg_0.2_sub10_scaffold_278_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25047..25640)
DNA (594bp) protein (198aa)
recR; recombination protein RecR; K06187 recombination protein RecR Tax=CG_Nitrosp_01
Recombination protein RecR id=3240234 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
recR; recombination protein RecR
cg_0.2_sub10_scaffold_278_c_26
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(25706..26581)
DNA (876bp) protein (292aa)
PAP2 superfamily protein Tax=CG_Nitrosp_01
PAP2 superfamily protein id=3240247 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
PAP2 superfamily protein
cg_0.2_sub10_scaffold_278_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(26578..27087)
DNA (510bp) protein (170aa)
hypothetical protein; K06962 Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3240250 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_278_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

27188..27463
DNA (276bp) protein (92aa)
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein id=4986313 bin=GWA2_Planctomycete_KSU_39_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
cg_0.2_sub10_scaffold_278_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

27460..27819
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000348EE85
Programmed cell death toxin YdcE Tax=CG_Nitrosp_01
growth inhibitor PemK
Displaying items 1-30 of 31 in total

View Taxonomy