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cg_0.2_sub10_scaffold_1251_c

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_1251_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

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comp(66..779)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B71F61
response regulator receiver protein Tax=CG_Nitrosp_01
histidine kinase
cg_0.2_sub10_scaffold_1251_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

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comp(992..2380)
DNA (1389bp) protein (463aa)
metallo-beta-lactamase superfamily; K07576 metallo-beta-lactamase family protein Tax=CG_Nitrosp_01
RNA-metabolising metallo-beta-lactamase id=3930046 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
metallo-beta-lactamase superfamily
cg_0.2_sub10_scaffold_1251_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

2521..3417
DNA (897bp) protein (299aa)
LysM domain protein Tax=CG_Nitrosp_01
LysM domain protein id=3930048 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
LysM domain-containing protein
cg_0.2_sub10_scaffold_1251_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3482..3874)
DNA (393bp) protein (131aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3930050 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_1251_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3971..5233)
DNA (1263bp) protein (421aa)
integral membrane protein Tax=CG_Nitrosp_01
Integral membrane protein with CBS domains id=3930052 bin=GWF2_Nitrospirae_44_13 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
integral membrane protein
cg_0.2_sub10_scaffold_1251_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(5243..6376)
DNA (1134bp) protein (378aa)
isocitrate dehydrogenase [NADP] (oxalosuccinatedecarboxylase) (idh) (nadp(+)-specific icdh) (EC:1.1.1.42); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=CG_Nitrosp_01
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] (Oxalosuccinatedecarboxylase) (Idh) (Nadp(+)-specific icdh) id=3930054 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_1251_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(6484..7719)
DNA (1236bp) protein (412aa)
2-isopropylmalate synthase 2 (EC:2.3.3.13); K02594 homocitrate synthase NifV [EC:2.3.3.14] Tax=CG_Nitrosp_01
2-isopropylmalate synthase 2 (EC:2.3.3.13)
2-isopropylmalate synthase 2 id=3930056 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_1251_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(7851..8516)
DNA (666bp) protein (222aa)
hypothetical protein; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3930058 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_1251_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(8562..8819)
DNA (258bp) protein (86aa)
RNA-binding protein Hfq; K03666 host factor-I protein Tax=CG_Nitrosp_01
Protein hfq id=1724514 bin=GWB2_Nitrospirae_rel_47_37 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RNA-binding protein Hfq
cg_0.2_sub10_scaffold_1251_c_10
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

8925..10325
DNA (1401bp) protein (467aa)
lipopolysaccharide heptosyltransferase III; K02849 heptosyltransferase III [EC:2.4.-.-] Tax=RBG_16_Nitrospirae_43_8_curated
Lipopolysaccharide heptosyltransferase III, putative id=3930060 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
lipopolysaccharide heptosyltransferase III
cg_0.2_sub10_scaffold_1251_c_11
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

10326..10610
DNA (285bp) protein (95aa)
Glycosyl transferase, group 1 id=3930065 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
glycosyl transferase, group 1 Tax=GWF2_Nitrospirae_44_13_curated
glycosyl transferase
Displaying 11 items

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