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cg_0.2_sub10_scaffold_277_c

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_277_c_1
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

539..628
DNA (90bp) protein (30aa)
Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_277_c_2
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(673..942)
DNA (270bp) protein (90aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=4335315 bin=GWC2_CP_Nitrospirae-rel_42_7 species=uncultured archaeon GZfos14B8 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_277_c_3
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(929..1213)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-N05 RepID=UPI0003753D14
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_277_c_4
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1488..1679
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YKI9_LYNSP
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_277_c_5
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

1672..1992
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00037587E9
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
cg_0.2_sub10_scaffold_277_c_6
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(2018..2767)
DNA (750bp) protein (250aa)
amino acid ABC transporter ATP-binding protein Tax=CG_Nitrosp_01
Putative Branched-chain amino acid ABC transporter, ATP-binding component id=4128054 bin=GWF2_Nitrospirae_44_13 species=Deinococcus deserti genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
amino acid ABC transporter ATP-binding protein
cg_0.2_sub10_scaffold_277_c_7
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(2800..3561)
DNA (762bp) protein (254aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K01995 branched-chain amino acid transport system ATP-binding protein Tax=CG_Nitrosp_01
Monosaccharide-transporting ATPase id=4128056 bin=GWF2_Nitrospirae_44_13 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
cg_0.2_sub10_scaffold_277_c_8
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(3542..4813)
DNA (1272bp) protein (424aa)
branched-chain amino acid ABC transporter permease/ATP-binding protein Tax=CG_Nitrosp_01
ABC tranpsorter, permease protein (N-ter) and ATP-binding protein (C-ter) putative branched-chain amino acid transport protein id=4128058 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
branched-chain amino acid ABC transporter permease/ATP-binding protein
cg_0.2_sub10_scaffold_277_c_9
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(4810..5712)
DNA (903bp) protein (301aa)
livH; high-affinity branched-chain amino acid ABC transporter permease Tax=CG_Nitrosp_01
High-affinity branched-chain amino acid ABC transporter (Permease protein) id=4128060 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
livH; high-affinity branched-chain amino acid ABC transporter permease
cg_0.2_sub10_scaffold_277_c_10
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

5816..6967
DNA (1152bp) protein (384aa)
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=CG_Nitrosp_01
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase id=4128062 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_277_c_11
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

7008..8267
DNA (1260bp) protein (420aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=CG_Nitrosp_01
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase id=4128065 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_277_c_12
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

8357..9934
DNA (1578bp) protein (526aa)
alpha-isopropylmalate/homocitrate synthase family transferase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Nitrosp_01
2-isopropylmalate synthase/homocitrate synthase family protein id=4128067 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
alpha-isopropylmalate/homocitrate synthase family transferase
cg_0.2_sub10_scaffold_277_c_13
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

9955..10389
DNA (435bp) protein (145aa)
hypothetical protein Tax=CG_Nitrosp_01
Tetratricopeptide TPR_2 repeat protein id=4128069 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_277_c_14
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(10410..12545)
DNA (2136bp) protein (712aa)
PAS/PAC sensor hybrid histidine kinase Tax=CG_Nitrosp_01
Multi-sensor hybrid histidine kinase id=2063199 bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
PAS/PAC sensor hybrid histidine kinase
cg_0.2_sub10_scaffold_277_c_15
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

comp(12744..13328)
DNA (585bp) protein (195aa)
PAS domain S-box Tax=CG_Nitrosp_01
Putative sensor with HAMP domain id=2205415 bin=GWB2_Nitrospirae_rel_47_37 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
PAS domain S-box
cg_0.2_sub10_scaffold_277_c_16
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13481..13849
DNA (369bp) protein (123aa)
Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_277_c_17
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

13819..14361
DNA (543bp) protein (181aa)
hypothetical protein Tax=CG_Nitrosp_01
Putative uncharacterized protein id=3874759 bin=GWF2_OP3_43_52 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
cg_0.2_sub10_scaffold_277_c_18
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

14455..14880
DNA (426bp) protein (142aa)
positive regulator of sigma E, RseC/MucC; K03803 sigma-E factor negative regulatory protein RseC Tax=CG_Nitrosp_01
Positive regulator of sigma E, RseC/MucC id=4128083 bin=GWF2_Nitrospirae_44_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
positive regulator of sigma E, RseC/MucC
cg_0.2_sub10_scaffold_277_c_19
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

14974..17097
DNA (2124bp) protein (708aa)
Elongation factor G id=4128086 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
fusA1; translation elongation factor G; K02355 elongation factor G Tax=GWF2_Nitrospirae_44_13_curated
fusA1; translation elongation factor G
cg_0.2_sub10_scaffold_277_c_20
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

17120..20023
DNA (2904bp) protein (968aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Nitrosp_01
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=4128088 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_277_c_21
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20020..20475
DNA (456bp) protein (152aa)
lspA; signal peptidase II (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Nitrosp_01
lspA; signal peptidase II (EC:3.4.23.36)
Lipoprotein signal peptidase id=4128090 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_277_c_22
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

20499..21263
DNA (765bp) protein (255aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=CG_Nitrosp_01
Prolipoprotein diacylglyceryl transferase id=4128092 bin=GWF2_Nitrospirae_44_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
prolipoprotein diacylglyceryl transferase
cg_0.2_sub10_scaffold_277_c_23
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists


comp(21282..22385)
DNA (1104bp) protein (368aa)
O-sialoglycoprotein endopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=CG_Nitrosp_01
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=4128094 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
O-sialoglycoprotein endopeptidase
cg_0.2_sub10_scaffold_277_c_24
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

22458..23213
DNA (756bp) protein (252aa)
hypothetical protein Tax=CG_Nitrosp_01
TPR repeat-containing protein id=4128095 bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
cg_0.2_sub10_scaffold_277_c_25
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

23420..24067
DNA (648bp) protein (216aa)
id=4128123 Tax=CG_Nitrosp_01
id=4128123 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cg_0.2_sub10_scaffold_277_c_26
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

24110..24427
DNA (318bp) protein (106aa)
hypothetical protein Tax=CG_Nitrosp_01
Uncharacterized protein id=3832268 bin=GWA2_Bacteroidetes_A19_40_15 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
hypothetical protein
cg_0.2_sub10_scaffold_277_c_27
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

24427..24642
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362F206
hypothetical protein Tax=CG_Nitrosp_01
cg_0.2_sub10_scaffold_277_c_28
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

24882..26285
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B6107A
DNA methyltransferase C1 Tax=CG_Nitrosp_01
DNA methyltransferase C1
cg_0.2_sub10_scaffold_277_c_29
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

26289..27242
DNA (954bp) protein (318aa)
Putative type II restriction enzyme n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YIR7_THEYD
type II restriction enzyme Tax=CG_Nitrosp_01
type II restriction enzyme
cg_0.2_sub10_scaffold_277_c_30
CG_Nitrosp_01, Nitrospirae, Bacteria

Not on your lists

27456..27653
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E9I4_GEOSM
hypothetical protein Tax=CG_Nitrosp_01
hypothetical protein
Displaying items 1-30 of 31 in total

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