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cg_0.2_sub10_scaffold_425_c

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_425_c_1
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(49..321)
DNA (273bp) protein (91aa)
hup; DNA-binding protein HU-beta; K03530 DNA-binding protein HU-beta Tax=CG_Nomura_02
Histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta id=5227367 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Bacterial nucleoid DNA-binding protein
cg_0.2_sub10_scaffold_425_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(636..2168)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWR2_9BACT
HDIG/KH domain-containing protein; K06950 uncharacterized protein Tax=CG_Nomura_02
HDIG/KH domain-containing protein
cg_0.2_sub10_scaffold_425_c_3
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(2394..2990)
DNA (597bp) protein (199aa)
clpP; ATP-dependent Clp protease proteolytic subunit; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=CG_Nomura_02
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=CLPP_MACCJ rbh
clpP; ATP-dependent Clp protease proteolytic subunit
cg_0.2_sub10_scaffold_425_c_4
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3318..4052
DNA (735bp) protein (245aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=CG_Nomura_02
Ribosomal RNA small subunit methyltransferase E id=1955907 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Surface protein
cg_0.2_sub10_scaffold_425_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5070..5606
DNA (537bp) protein (179aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5690..5881)
DNA (192bp) protein (64aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5998..7017)
DNA (1020bp) protein (340aa)
Cell division trigger factor (EC:5.2.1.8) Tax=CG_Nomura_02
Cell division trigger factor (EC:5.2.1.8)
tig; trigger factor; K03545 trigger factor id=5803132 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_425_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7276..7572)
DNA (297bp) protein (99aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7602..8441)
DNA (840bp) protein (280aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8538..9074)
DNA (537bp) protein (179aa)
ppa; inorganic pyrophosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] Tax=CG_Nomura_02
inorganic diphosphatase (EC:3.6.1.1); K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=8088 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
cg_0.2_sub10_scaffold_425_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9107..10372)
DNA (1266bp) protein (422aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=CG_Nomura_02
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=5803127 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
NusA antitermination factor
cg_0.2_sub10_scaffold_425_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10562..10837
DNA (276bp) protein (92aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_13
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

10934..12682
DNA (1749bp) protein (583aa)
Tfp pilus assembly protein PilB Tax=GWA1_OD1_44_13
Tfp pilus assembly protein PilB; K02652 type IV pilus assembly protein PilB id=5803124 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
secretion system protein E
cg_0.2_sub10_scaffold_425_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12860..14074
DNA (1215bp) protein (405aa)
type II secretory pathway, component PulF Tax=CG_Nomura_02
type IV pilin; K02653 type IV pilus assembly protein PilC id=5227504 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
type II secretory pathway, component PulF
cg_0.2_sub10_scaffold_425_c_15
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14092..14622
DNA (531bp) protein (177aa)
hypothetical protein Tax=CG_Nomura_02
hypothetical protein id=1263599 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
cg_0.2_sub10_scaffold_425_c_16
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14631..15191
DNA (561bp) protein (187aa)
id=2824648 Tax=CG_Nomura_02
id=2824648 bin=GWC1_OD1_38_17 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cg_0.2_sub10_scaffold_425_c_17
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15210..15809
DNA (600bp) protein (200aa)
transmembrane_regions Tax=CG_Nomura_02
transmembrane_regions id=5227507 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_425_c_18
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15816..17162
DNA (1347bp) protein (449aa)
transmembrane_regions Tax=CG_Nomura_02
S-layer domain protein id=2824651 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cg_0.2_sub10_scaffold_425_c_19
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17287..18054
DNA (768bp) protein (256aa)
tpiA; triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=CG_Nomura_02
triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] id=5803118 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tpiA; triosephosphate isomerase
cg_0.2_sub10_scaffold_425_c_20
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18076..18594
DNA (519bp) protein (173aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_425_c_21
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18618..19769
DNA (1152bp) protein (384aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] Tax=CG_Nomura_02
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5803116 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pgk; phosphoglycerate kinase (EC:2.7.2.3)
cg_0.2_sub10_scaffold_425_c_22
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19775..21025
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZR0_9BACT
Major facilitator superfamily domain-containing protein 10 Tetracycline transporter-like protein Tax=CG_Nomura_02
Major facilitator superfamily domain-containing protein 10 Tetracycline transporter-like protein
cg_0.2_sub10_scaffold_425_c_23
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21072..21434)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY87_9BACT
transmembrane_regions Tax=CG_Nomura_02
Displaying 23 items

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