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cg_0.2_sub10_scaffold_346_c

Search features with annotation key words

Displaying items 1-30 of 55 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_346_c_1
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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271..1716
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000382A27F
putative DEAD/DEAH box helicase domain protein Tax=CG_Nomura_02
ATP-dependent RNA helicase RhlE
cg_0.2_sub10_scaffold_346_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1969..2493
DNA (525bp) protein (175aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=CG_Nomura_02
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
sigW_1; RNA polymerase sigma-W factor
cg_0.2_sub10_scaffold_346_c_3
unknown

Not on your lists

2490..2645
DNA (156bp) protein (52aa)

This feature has no annotations

cg_0.2_sub10_scaffold_346_c_4
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2629..3621
DNA (993bp) protein (331aa)
fc32f04, wu:fc32f04; si:ch211-116m6.3 Tax=CG_Nomura_02
fc32f04, wu:fc32f04; si:ch211-116m6.3 id=5802133 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
cg_0.2_sub10_scaffold_346_c_5
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3759..3980
DNA (222bp) protein (74aa)
hypothetical protein; K09779 hypothetical protein Tax=CG_Nomura_02
id=3676537 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
cg_0.2_sub10_scaffold_346_c_6
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4139..5191
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00035D98AA
ATPase Tax=CG_Nomura_02
ATPase
cg_0.2_sub10_scaffold_346_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(5130..6224)
DNA (1095bp) protein (365aa)
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K02945 small subunit ribosomal protein S1; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=CG_Nomura
RNA binding S1 protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW51_9BACT
30S ribosomal protein S1
cg_0.2_sub10_scaffold_346_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6804..7433
DNA (630bp) protein (210aa)
beta-lactamase fold-like Zn-dependent hydrolase Tax=CG_Nomura_02
id=5803530 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
beta-lactamase fold-like Zn-dependent hydrolase
cg_0.2_sub10_scaffold_346_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7450..7776
DNA (327bp) protein (109aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_346_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


7946..10414
DNA (2469bp) protein (823aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) Tax=CG_Nomura_02
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5803528 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
cg_0.2_sub10_scaffold_346_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10664..11188
DNA (525bp) protein (175aa)
methylase involved in ubiquinone/menaquinone biosynthesis Tax=CG_Nomura_02
type 11 methyltransferase id=5803526 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methylase involved in ubiquinone/menaquinone biosynthesis
cg_0.2_sub10_scaffold_346_c_12
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11204..12526
DNA (1323bp) protein (441aa)
transmembrane_regions Tax=CG_Nomura_02
transmembrane_regions id=5803525 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_346_c_13
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12573..12989
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=CG_Nomura_02
Putative uncharacterized protein id=5227148 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_346_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13126..13683
DNA (558bp) protein (186aa)
hypothetical protein Tax=CG_Nomura_02
Uncharacterized protein id=5227147 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
cg_0.2_sub10_scaffold_346_c_15
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13689..13976
DNA (288bp) protein (96aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_346_c_16
GWA1_OD1_44_13, Parcubacteria, Bacteria

Not on your lists

14171..14518
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT37476.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
cg_0.2_sub10_scaffold_346_c_17
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14541..14780
DNA (240bp) protein (80aa)
transmembrane_regions Tax=CG_Nomura_02
transmembrane_regions id=5227144 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_346_c_18
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14998..15831)
DNA (834bp) protein (278aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_346_c_19
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15828..16865)
DNA (1038bp) protein (346aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_346_c_trna_1
unknown

Not on your lists

17023..17106
DNA (84bp)
transferRNA
cg_0.2_sub10_scaffold_346_c_trna_2
unknown

Not on your lists

17237..17309
DNA (73bp)
transferRNA
cg_0.2_sub10_scaffold_346_c_trna_3
unknown

Not on your lists

17363..17445
DNA (83bp)
transferRNA
cg_0.2_sub10_scaffold_346_c_trna_9
unknown

Not on your lists

comp(17677..17757)
DNA (81bp)
transferRNA
cg_0.2_sub10_scaffold_346_c_trna_8
unknown

Not on your lists

comp(17958..18029)
DNA (72bp)
transferRNA
cg_0.2_sub10_scaffold_346_c_20
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18043..18216)
DNA (174bp) protein (58aa)
hypothetical protein Tax=CG_Nomura_02
hypothetical protein id=96504 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cg_0.2_sub10_scaffold_346_c_21
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18258..18584)
DNA (327bp) protein (109aa)
Ribosome-binding factor A Tax=CG_Nomura_02
Ribosome-binding factor A id=5803474 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_346_c_22
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18634..20169)
DNA (1536bp) protein (512aa)
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=CG_Nomura_02
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 id=5803475 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infB; translation initiation factor IF-2
cg_0.2_sub10_scaffold_346_c_23
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20212..20676)
DNA (465bp) protein (155aa)
hypothetical protein Tax=CG_Nomura_02
hypothetical protein id=5803476 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
cg_0.2_sub10_scaffold_346_c_24
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

21067..22254
DNA (1188bp) protein (396aa)
cysteine desulfurase NifS (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=CG_Nomura_02
chy:CHY_2199 iscS; cysteine desulfurase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] id=99163 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
cysteine desulfurase NifS (EC:2.8.1.7)
cg_0.2_sub10_scaffold_346_c_25
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22304..22939
DNA (636bp) protein (212aa)
Superoxide dismutase (EC:1.15.1.1) Tax=CG_Nomura_02
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
Displaying items 1-30 of 55 in total

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