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cg_0.2_sub10_scaffold_1312_c

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_1312_c_1
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(79..2043)
DNA (1965bp) protein (655aa)
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=CG_Nomura_02
primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=5227121 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
primosomal protein N'
cg_0.2_sub10_scaffold_1312_c_2
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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2115..3602
DNA (1488bp) protein (496aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=CG_Nomura_02
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] id=5803603 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
cg_0.2_sub10_scaffold_1312_c_3
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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3606..4619
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYT3_9BACT
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Nomura_02
rod shape-determining protein MreB
cg_0.2_sub10_scaffold_1312_c_4

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4729..5436
DNA (708bp) protein (236aa)
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Polymerase III subunit gamma and tau protein {ECO:0000313|EMBL:KKT59578.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
DNA polymerase III, delta' subunit id=1903434 bin=GWD2_Nitrospirae-related_57_8 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cg_0.2_sub10_scaffold_1312_c_5
GWA1_OD1_44_13, Parcubacteria, Bacteria

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5673..6227
DNA (555bp) protein (185aa)
Ribosome-recycling factor {ECO:0000313|EMBL:KKT38183.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
Frr; K02838 ribosome recycling factor id=5803375 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
frr; ribosome recycling factor
cg_0.2_sub10_scaffold_1312_c_6
GWA1_OD1_44_13, Parcubacteria, Bacteria

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6319..7431
DNA (1113bp) protein (371aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] id=5227116 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKT38184.1}; TaxID=1618788 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_44_13.;"
membrane-associated zinc metalloprotease
cg_0.2_sub10_scaffold_1312_c_7
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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comp(7478..7735)
DNA (258bp) protein (86aa)
Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1312_c_8
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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7846..9102
DNA (1257bp) protein (419aa)
proS; prolyl-tRNA synthetase (EC:6.1.1.15) Tax=CG_Nomura_02
Proline--tRNA ligase n=1 Tax=Turicibacter sp. PC909 RepID=D4W313_9FIRM id=17365 bin=ACD1 species=Turicibacter sanguinis genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
prolyl-tRNA synthetase
cg_0.2_sub10_scaffold_1312_c_9
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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9114..10163
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWV6_9BACT
rod shape-determining protein mreb; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Nomura_02
rod shape-determining protein mreb
cg_0.2_sub10_scaffold_1312_c_10
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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10144..10929
DNA (786bp) protein (262aa)
Rod shape-determining protein MreC Tax=CG_Nomura_02
Rod shape-determining protein MreC id=5803380 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1312_c_11
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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11048..11296
DNA (249bp) protein (83aa)
transmembrane_regions Tax=CG_Nomura_02
cg_0.2_sub10_scaffold_1312_c_12
unknown

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11374..11478
DNA (105bp) protein (35aa)

This feature has no annotations

cg_0.2_sub10_scaffold_1312_c_13
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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11512..13263
DNA (1752bp) protein (584aa)
penicillin-binding protein 2; K05515 penicillin-binding protein 2 Tax=CG_Nomura_02
penicillin-binding protein 2; K05515 penicillin-binding protein 2 id=5803382 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
putative penicillin-binding protein
cg_0.2_sub10_scaffold_1312_c_14
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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13405..13872
DNA (468bp) protein (156aa)
transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=CG_Nomura_02
Transcription elongation factor GreA id=4995450 bin=GWA2_OP3_53_43 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
transcription elongation factor GreA
cg_0.2_sub10_scaffold_1312_c_15
CG_Nomura_02, Nomurabacteria, Parcubacteria, Bacteria

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13929..14831
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037C5D03
lysyl-tRNA synthetase (class II) Tax=CG_Nomura_02
lysU; Lysyl-tRNA synthetase (class II)
Displaying 15 items

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