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cg_0.2_sub10_scaffold_442_c

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_442_c_1
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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comp(68..778)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000375F917
DsbA family oxidoreductase Tax=CG_Nomura_01
Sodium/proton antiporter
cg_0.2_sub10_scaffold_442_c_2
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

819..1397
DNA (579bp) protein (193aa)
ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=CG_Nomura_01
engB; GTP-binding protein; K03978 GTP-binding protein id=5803670 bin=OD1_GWC2_34_28 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosome biogenesis GTP-binding protein YsxC
cg_0.2_sub10_scaffold_442_c_3
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1539..2462
DNA (924bp) protein (308aa)
heavy metal ABC transporter substrate-binding protein; K09815 zinc transport system substrate-binding protein Tax=CG_Nomura_01
ABC-type metal ion transport system, periplasmic component/surface adhesin id=4778977 bin=GWA2_OP3_52_12 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
heavy metal ABC transporter substrate-binding protein
cg_0.2_sub10_scaffold_442_c_4
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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2453..3220
DNA (768bp) protein (256aa)
ABC transporter ATP-binding protein; K09817 zinc transport system ATP-binding protein [EC:3.6.3.-] Tax=CG_Nomura_01
ABC transporter related protein id=4778974 bin=GWA2_OP3_52_12 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
ABC transporter ATP-binding protein
cg_0.2_sub10_scaffold_442_c_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3213..4010
DNA (798bp) protein (266aa)
ABC protein; K09816 zinc transport system permease protein Tax=CG_Nomura_01
ABC transporter permease; K09816 zinc transport system permease protein id=15192235 bin=GWC2_NOV_55_46 species=ACD61 genus=ACD61 taxon_order=ACD61 taxon_class=ACD61 phylum=OP11 tax=GWC2_NOV_55_46 organism_group=Proteobacteria
ABC protein
cg_0.2_sub10_scaffold_442_c_6
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

4077..4397
DNA (321bp) protein (107aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_7
unknown

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4394..4636
DNA (243bp) protein (81aa)

This feature has no annotations

cg_0.2_sub10_scaffold_442_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4713..6365)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000370933F
putative oxidoreductase Tax=CG_Nomura_01
putative oxidoreductase
cg_0.2_sub10_scaffold_442_c_9
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6449..7006)
DNA (558bp) protein (186aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_10
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7109..8344)
DNA (1236bp) protein (412aa)
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Nomura_01
hypothetical protein; K02004 putative ABC transport system permease protein id=5802299 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
multidrug ABC transporter substrate-binding protein
cg_0.2_sub10_scaffold_442_c_11
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8350..9072)
DNA (723bp) protein (241aa)
ABC transporter; K02003 putative ABC transport system ATP-binding protein Tax=CG_Nomura_01
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein id=5095696 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
ABC transporter
cg_0.2_sub10_scaffold_442_c_12
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9074..10579)
DNA (1506bp) protein (502aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein Tax=CG_Nomura_01
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein id=5802297 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
RND family efflux transporter MFP subunit
cg_0.2_sub10_scaffold_442_c_13
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10668..13211)
DNA (2544bp) protein (848aa)
cation-transporting P-type ATPase (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2] Tax=CG_Nomura_01
Cation-transporting P-type ATPase id=2194741 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
cg_0.2_sub10_scaffold_442_c_14
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(13244..13879)
DNA (636bp) protein (212aa)
ctpC; metal cation-transporting p-type ATPase C CtpC; K12950 cation-transporting P-type ATPase C [EC:3.6.3.-] Tax=CG_Nomura_01
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVU5_9FLAO
ctpC; metal cation-transporting p-type ATPase CtpC
cg_0.2_sub10_scaffold_442_c_15
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(14019..15113)
DNA (1095bp) protein (365aa)
Copper/silver-translocating P-type ATPase n=1 Tax=Bacillus nealsonii AAU1 RepID=R9C1W6_9BACI
copper/silver-translocating P-type ATPase Tax=CG_Nomura_01
copper/silver-translocating P-type ATPase
cg_0.2_sub10_scaffold_442_c_16
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15130..15648)
DNA (519bp) protein (173aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_17
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15660..17117)
DNA (1458bp) protein (486aa)
Putative uncharacterized protein (Fragment) Tax=CG_Nomura_01
Putative uncharacterized protein (Fragment) id=4800155 bin=GWC2_OD1_43_27 species=Dictyostelium fasciculatum genus=Dictyostelium taxon_order=Dictyosteliida taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
cg_0.2_sub10_scaffold_442_c_18
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17204..18454)
DNA (1251bp) protein (417aa)
flavoprotein; K07007 Tax=CG_Nomura_01
Flavoprotein, HI0933 family id=3012810 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
flavoprotein
cg_0.2_sub10_scaffold_442_c_19
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18510..18920
DNA (411bp) protein (137aa)
nuclear protein SET (EC:2.1.1.43); K07117 Tax=CG_Nomura_01
nuclear protein SET (EC:2.1.1.43)
Nuclear protein SET n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQM6_NITWN
cg_0.2_sub10_scaffold_442_c_20
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19006..20247)
DNA (1242bp) protein (414aa)
Multidrug transporter, putative n=1 Tax=Algoriphagus sp. PR1 RepID=A3I0S1_9BACT id=42167 bin=ACD37 species=Algoriphagus machipongonensis genus=Algoriphagus taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Major facilitator superfamily domain-containing protein 10 Tetracycline transporter-like protein Tax=CG_Nomura_01
Major facilitator superfamily domain-containing protein 10 Tetracycline transporter-like protein
cg_0.2_sub10_scaffold_442_c_21
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20349..20669)
DNA (321bp) protein (107aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_22
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20675..20797)
DNA (123bp) protein (41aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_23
unknown

Not on your lists

comp(21153..21665)
DNA (513bp) protein (171aa)

This feature has no annotations

cg_0.2_sub10_scaffold_442_c_24
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22130..23047
DNA (918bp) protein (306aa)
Cytochrome b/b6 n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGK1_9EURY rbh
Cytochrome b/b6 Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_25
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23125..23904)
DNA (780bp) protein (260aa)
uppP; UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=CG_Nomura_01
uppP; UDP-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase id=3960369 bin=GWF2_OP3_38_59 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
cg_0.2_sub10_scaffold_442_c_26
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(23936..24436)
DNA (501bp) protein (167aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_27
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(24950..26011)
DNA (1062bp) protein (354aa)
hypothetical protein
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_442_c_28
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

26065..27060
DNA (996bp) protein (332aa)
Tax=CG_Nomura_01
Displaying 28 items

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