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cg_0.2_sub10_scaffold_1486_c

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_1486_c_1
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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1..318
DNA (318bp) protein (106aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_1486_c_2
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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324..2048
DNA (1725bp) protein (575aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_Nomura_01
general secretion pathway protein E id=5803081 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV-A pilus assembly ATPase PilB
cg_0.2_sub10_scaffold_1486_c_3
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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2139..2552
DNA (414bp) protein (138aa)
response regulator receiver protein; K03413 two-component system, chemotaxis family, response regulator CheY Tax=CG_Nomura_01
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator id=5803080 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Two component transcriptional regulator, winged helix
cg_0.2_sub10_scaffold_1486_c_4
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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2557..3627
DNA (1071bp) protein (357aa)
twitching motility protein; K02669 twitching motility protein PilT Tax=CG_Nomura_01
twitching motility protein; K02669 twitching motility protein PilT id=5803079 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
twitching motility protein
cg_0.2_sub10_scaffold_1486_c_5
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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3646..4842
DNA (1197bp) protein (399aa)
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC Tax=CG_Nomura_01
Type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=5803078 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type II secretion system f domain
cg_0.2_sub10_scaffold_1486_c_6
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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5204..5620
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0K9_9BACT
pilin, type IV; K02650 type IV pilus assembly protein PilA Tax=CG_Nomura_01
pilin, type IV
cg_0.2_sub10_scaffold_1486_c_7
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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5830..6681
DNA (852bp) protein (284aa)
peptidase A24A domain-containing protein; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Nomura_01
Prepilin peptidase-1 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXW4_9BACT
peptidase A24A domain-containing protein
cg_0.2_sub10_scaffold_1486_c_8
CG_Nomura_01, Nomurabacteria, Parcubacteria, Bacteria

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6678..7262
DNA (585bp) protein (195aa)
Tax=CG_Nomura_01
cg_0.2_sub10_scaffold_1486_c_9
GWC1_OD1_42_11, Parcubacteria, Bacteria

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7264..7932
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS27078.1}; TaxID=1618905 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
transmembrane_regions id=5227290 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cg_0.2_sub10_scaffold_1486_c_10

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7922..8491
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036B2A48
Uncharacterized protein {ECO:0000313|EMBL:KKT60881.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
cg_0.2_sub10_scaffold_1486_c_11
GWC2_OD1_42_20, Nomurabacteria, Parcubacteria, Bacteria

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8501..8926
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS48321.1}; TaxID=1618756 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_42_20.;"
seg id=5803072 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cg_0.2_sub10_scaffold_1486_c_12
GWC1_OD1_42_11, Parcubacteria, Bacteria

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9085..11118
DNA (2034bp) protein (678aa)
DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] id=5803071 bin=OD1_GWC2_34_28 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Ligase protein {ECO:0000313|EMBL:KKS27081.1}; TaxID=1618905 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
DNA ligase, NAD-dependent
cg_0.2_sub10_scaffold_1486_c_13

Not on your lists

11123..11617
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT60766.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
cg_0.2_sub10_scaffold_1486_c_14
GWC1_OD1_42_11, Parcubacteria, Bacteria

Not on your lists

11614..12627
DNA (1014bp) protein (338aa)
Cell wall/surface repeat protein {ECO:0000313|EMBL:KKS27083.1}; TaxID=1618905 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
Displaying 14 items

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