ggKbase home page

cg_0.2_sub10_scaffold_522_c

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_522_c_1
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..275
DNA (273bp) protein (91aa)
Integrase catalytic region n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0R764_9DELT
Integrase catalytic region (fragment)
Integrase catalytic region {ECO:0000313|EMBL:CCO22579.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulf
cg_0.2_sub10_scaffold_522_c_2
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(490..1083)
DNA (594bp) protein (198aa)
Tax=CG_Proteo_01
cg_0.2_sub10_scaffold_522_c_3
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(1332..3308)
DNA (1977bp) protein (659aa)
UvrABC system protein B n=1 Tax=Pseudomonas sp. UW4 RepID=K9NKM9_9PSED
uvrB; excinuclease ABC subunit B Tax=CG_Proteo_01
uvrB; excinuclease ABC subunit B
cg_0.2_sub10_scaffold_522_c_4
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(3386..3811)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CGC1_9GAMM
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
cg_0.2_sub10_scaffold_522_c_5
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(3860..4561)
DNA (702bp) protein (234aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=CG_Proteo_01
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FT06_DESHD
cg_0.2_sub10_scaffold_522_c_6
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(4665..5363)
DNA (699bp) protein (233aa)
orotidine-5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=CG_Proteo_01
Orotidine 5'-phosphate decarboxylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INF5_KORVE
orotidine-5'-phosphate decarboxylase
cg_0.2_sub10_scaffold_522_c_7
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(5360..6616)
DNA (1257bp) protein (419aa)
TPR repeat-containing protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QGH5_DESB2
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
cg_0.2_sub10_scaffold_522_c_8
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(6635..6937)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E3P9_FLESM
hypothetical protein Tax=CG_Proteo_01
hypothetical protein
cg_0.2_sub10_scaffold_522_c_9
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(6978..7256)
DNA (279bp) protein (93aa)
Integration host factor subunit beta n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVB3_9RHOB
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta Tax=CG_Proteo_01
ihfB; Integration host factor beta-subunit (IHF-beta)
cg_0.2_sub10_scaffold_522_c_10
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(7327..8172)
DNA (846bp) protein (282aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=CG_Proteo_01
signal peptide peptidase SppA, 36K type (EC:3.1.3.2)
Signal peptide peptidase SppA, 36K type n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DM05_DESVM
cg_0.2_sub10_scaffold_522_c_11
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists


comp(8260..10044)
DNA (1785bp) protein (595aa)
30S ribosomal protein S1 n=1 Tax=Spiribacter salinus M19-40 RepID=R4VEU7_9GAMM
rpsA; 30S ribosomal protein S1 Tax=CG_Proteo_01
30S ribosomal protein S1
cg_0.2_sub10_scaffold_522_c_12
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(10169..11089)
DNA (921bp) protein (307aa)
ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase; K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=CG_Proteo_01
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=ISPH_GEOBB rbh
ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
cg_0.2_sub10_scaffold_522_c_13
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(11100..11771)
DNA (672bp) protein (224aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Proteo_01
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RTR9_ALLVD
cg_0.2_sub10_scaffold_522_c_14
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(11764..13098)
DNA (1335bp) protein (445aa)
5-Enolpyruvylshikimate-3-phosphate synthase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=CG_Proteo_01
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Acidithiobacillus caldus RepID=F9ZNP0_ACICS
5-Enolpyruvylshikimate-3-phosphate synthase
cg_0.2_sub10_scaffold_522_c_15
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(13107..14006)
DNA (900bp) protein (300aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=CG_Proteo_01
Prephenate dehydrogenase n=2 Tax=Geobacter sulfurreducens RepID=D7AKY1_GEOSK
tyrA; prephenate dehydrogenase
cg_0.2_sub10_scaffold_522_c_16
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(14017..15048)
DNA (1032bp) protein (344aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=CG_Proteo_01
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EPR9_ACIF5
phospho-2-dehydro-3-deoxyheptonate aldolase
cg_0.2_sub10_scaffold_522_c_17
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(15085..16182)
DNA (1098bp) protein (366aa)
hisC2; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_Proteo_01
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI0003799B55
hisC2; histidinol-phosphate aminotransferase
cg_0.2_sub10_scaffold_522_c_18
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(16179..17300)
DNA (1122bp) protein (374aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=CG_Proteo_01
Chorismate mutase n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RV74_ALLVD
chorismate mutase
cg_0.2_sub10_scaffold_522_c_19
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(17479..18225)
DNA (747bp) protein (249aa)
Tax=CG_Proteo_01
cg_0.2_sub10_scaffold_522_c_20
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(18437..18940)
DNA (504bp) protein (168aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] Tax=CG_Proteo_01
Protein thiED n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S6W9_9PROT
phosphomethylpyrimidine kinase
Displaying 20 items

View Taxonomy