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cg_0.2_sub10_scaffold_137_c

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_137_c_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..554)
DNA (552bp) protein (184aa)
coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=CG_Thiomicrospira_01
Coproporphyrinogen-III oxidase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IC6_THICR
coproporphyrinogen III oxidase
cg_0.2_sub10_scaffold_137_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646..2019)
DNA (1374bp) protein (458aa)
Diguanylate cyclase (GGDEF domain) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IC7_THICR
diguanylate cyclase Tax=CG_Thiomicrospira_01
diguanylate cyclase
cg_0.2_sub10_scaffold_137_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2055..4259)
DNA (2205bp) protein (735aa)
rlmL; 23S rRNA m(2)G2445 methyltransferase; K12297 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] Tax=CG_Thiomicrospira_01
Ribosomal RNA large subunit methyltransferase K/L n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RLMKL_THICR rbh
rlmL; 23S rRNA m(2)G2445 methyltransferase
cg_0.2_sub10_scaffold_137_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4399..5622
DNA (1224bp) protein (408aa)
lytic murein transglycosylase; K08305 membrane-bound lytic murein transglycosylase B [EC:3.2.1.-] Tax=CG_Thiomicrospira_01
Lytic murein transglycosylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IC9_THICR
lytic murein transglycosylase
cg_0.2_sub10_scaffold_137_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5809..6309)
DNA (501bp) protein (167aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Thiomicrospira_01
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LSPA_THICR rbh
cg_0.2_sub10_scaffold_137_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6388..9216)
DNA (2829bp) protein (943aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CG_Thiomicrospira_01
Isoleucine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31ID2_THICR
isoleucyl-tRNA synthetase
cg_0.2_sub10_scaffold_137_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9358..10299)
DNA (942bp) protein (314aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=CG_Thiomicrospira_01
Riboflavin kinase / FMN adenylyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31ID3_THICR
riboflavin biosynthesis protein RibF
cg_0.2_sub10_scaffold_137_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10361..11134)
DNA (774bp) protein (258aa)
UPF0246 protein Tcr_1650 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Y1650_THICR rbh
hypothetical protein; K09861 hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_137_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11141..11407)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F30_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_137_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11431..12093)
DNA (663bp) protein (221aa)
Nucleotidyltransferase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F29_THICR
nucleotidyl transferase Tax=CG_Thiomicrospira_01
nucleotidyl transferase
cg_0.2_sub10_scaffold_137_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12090..13133)
DNA (1044bp) protein (348aa)
Phosphotransferase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F28_THICR
aminoglycoside phosphotransferase; K07102 Tax=CG_Thiomicrospira_01
aminoglycoside phosphotransferase
cg_0.2_sub10_scaffold_137_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13278..15662
DNA (2385bp) protein (795aa)
Organic solvent tolerance protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F27_THICR
organic solvent tolerance protein; K04744 LPS-assembly protein Tax=CG_Thiomicrospira_01
organic solvent tolerance protein
cg_0.2_sub10_scaffold_137_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..17014
DNA (1332bp) protein (444aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=CG_Thiomicrospira_01
Chaperone SurA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SURA_THICR rbh
PpiC-type peptidyl-prolyl cis-trans isomerase
cg_0.2_sub10_scaffold_137_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17015..18037
DNA (1023bp) protein (341aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=CG_Thiomicrospira_01
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F25_THICR
cg_0.2_sub10_scaffold_137_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18018..18815
DNA (798bp) protein (266aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_Thiomicrospira_01
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RSMA_THICR rbh
dimethyladenosine transferase
cg_0.2_sub10_scaffold_137_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18819..19673
DNA (855bp) protein (285aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41); K01525 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] Tax=CG_Thiomicrospira_01
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Calcineurin-like phosphoesterase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F23_THICR
cg_0.2_sub10_scaffold_137_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19686..20285
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F22_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_137_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20287..20667)
DNA (381bp) protein (127aa)
Transcriptional regulator, MerR family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F21_THICR
MerR family transcriptional regulator Tax=CG_Thiomicrospira_01
MerR family transcriptional regulator
cg_0.2_sub10_scaffold_137_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20654..20947)
DNA (294bp) protein (98aa)
Integration host factor subunit alpha n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=IHFA_THICR rbh
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=CG_Thiomicrospira_01
integration host factor subunit alpha
cg_0.2_sub10_scaffold_137_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20987..23368)
DNA (2382bp) protein (794aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Thiomicrospira_01
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYFB_THICR rbh
cg_0.2_sub10_scaffold_137_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23393..24391)
DNA (999bp) protein (333aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Thiomicrospira_01
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYFA_THICR rbh
cg_0.2_sub10_scaffold_137_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24626..24982)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL20_THICR rbh
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_Thiomicrospira_01
rplT; 50S ribosomal protein L20
cg_0.2_sub10_scaffold_137_c_23
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24995..25192)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL35_THICR rbh
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicr
cg_0.2_sub10_scaffold_137_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25428..25766)
DNA (339bp) protein (113aa)
Bacterial translation initiation factor 3 (BIF-3) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F15_THICR
initiation factor 3; K02520 translation initiation factor IF-3 Tax=CG_Thiomicrospira_01
initiation factor 3
cg_0.2_sub10_scaffold_137_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26011..27939)
DNA (1929bp) protein (643aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Thiomicrospira_01
Threonine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYT_THICR rbh
threonyl-tRNA synthetase
cg_0.2_sub10_scaffold_137_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28062..28937)
DNA (876bp) protein (292aa)
Putative signal transduction protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F12_THICR
signal transduction protein Tax=CG_Thiomicrospira_01
signal transduction protein
cg_0.2_sub10_scaffold_137_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29189..29836
DNA (648bp) protein (216aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=CG_Thiomicrospira_01
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F10_THICR
cg_0.2_sub10_scaffold_137_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29943..30797)
DNA (855bp) protein (285aa)
DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=CG_Thiomicrospira_01
DNA ligase (EC:6.5.1.1)
ATP dependent DNA ligase, central n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F09_THICR
cg_0.2_sub10_scaffold_137_c_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30797..31063)
DNA (267bp) protein (89aa)
Competence protein ComEA helix-hairpin-helix family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F08_THICR
competence protein ComEA helix-hairpin-helix region; K02237 competence protein ComEA Tax=CG_Thiomicrospira_01
competence protein ComEA helix-hairpin-helix region
cg_0.2_sub10_scaffold_137_c_30
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31362..32408
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F51_THICR
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Thiomicrospira_01
rod shape-determining protein MreB
Displaying items 1-30 of 45 in total

View Taxonomy
NameRatio
CG_Thiomicrospira_01
95.56%
unknown
2.22%
Thiomicrospira crunogena
2.22%
CG_Thiomicrospira_01: 0.9555555555555556Thiomicrospira crunogena: 0.022222222222222223unknown: 0.022222222222222223CG_Thiomicrospira_01