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cg_0.2_sub10_scaffold_188_c

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_188_c_1
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16..1173)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. AKL9 RepID=UPI0003621913
transposase IS4 family protein Tax=CG_Mariprof_03
transposase IS4 family protein
cg_0.2_sub10_scaffold_188_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1237..1629)
DNA (393bp) protein (131aa)
glycosyl transferase n=1 Tax=Thiomicrospira halophila RepID=UPI0003752BFD
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_188_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1661..2446)
DNA (786bp) protein (262aa)
HAD family hydrolase YedP (EC:3.1.3.70); K07026 mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] Tax=CG_Thiomicrospira_01
HAD family hydrolase YedP (EC:3.1.3.70)
Mannosyl-3-phosphoglycerate phosphatase family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HK5_THICR
cg_0.2_sub10_scaffold_188_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2669..3493)
DNA (825bp) protein (275aa)
dihydropteroate synthase (EC:2.5.1.15); K00796 dihydropteroate synthase [EC:2.5.1.15] Tax=CG_Thiomicrospira_01
dihydropteroate synthase (EC:2.5.1.15) rbh
Dihydropteroate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG4_THICR
cg_0.2_sub10_scaffold_188_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3583..5535)
DNA (1953bp) protein (651aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=CG_Thiomicrospira_01
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG5_THICR
cg_0.2_sub10_scaffold_188_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5677..6294)
DNA (618bp) protein (206aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=CG_Thiomicrospira_01
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RLME_THICR rbh
ribosomal RNA methyltransferase RrmJ/FtsJ
cg_0.2_sub10_scaffold_188_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6379..6684
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG7_THICR
hypothetical protein; K07574 RNA-binding protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_188_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6715..7893)
DNA (1179bp) protein (393aa)
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48); K10764 O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] Tax=CG_Thiomicrospira_01
O-succinylhomoserine sulfhydrylase (EC:2.5.1.48)
Homocysteine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG8_THICR
cg_0.2_sub10_scaffold_188_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7886..9406)
DNA (1521bp) protein (507aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=CG_Thiomicrospira_01
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HG9_THICR
cg_0.2_sub10_scaffold_188_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9686..10297)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH0_THICR
sporulation related protein Tax=CG_Thiomicrospira_01
sporulation related protein
cg_0.2_sub10_scaffold_188_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10290..11567)
DNA (1278bp) protein (426aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=CG_Thiomicrospira_01
FolC bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH1_THICR
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
cg_0.2_sub10_scaffold_188_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11607..12461)
DNA (855bp) protein (285aa)
acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=CG_Thiomicrospira_01
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=ACCD_THICR rbh
acetyl-CoA carboxylase, carboxyl transferase subunit beta
cg_0.2_sub10_scaffold_188_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12563..13387)
DNA (825bp) protein (275aa)
tryptophan synthase subunit alpha (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=CG_Thiomicrospira_01
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TRPA_THICR rbh
cg_0.2_sub10_scaffold_188_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13389..14594)
DNA (1206bp) protein (402aa)
tryptophan synthase subunit beta (EC:4.2.1.20); K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=CG_Thiomicrospira_01
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH4_THICR
cg_0.2_sub10_scaffold_188_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14690..15328)
DNA (639bp) protein (213aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=CG_Thiomicrospira_01
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH5_THICR
cg_0.2_sub10_scaffold_188_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15331..16125)
DNA (795bp) protein (265aa)
tRNA pseudouridine synthase A (EC:4.2.1.70); K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=CG_Thiomicrospira_01
tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=TRUA_THICR rbh
cg_0.2_sub10_scaffold_188_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16136..17158)
DNA (1023bp) protein (341aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=CG_Thiomicrospira_01
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH7_THICR
cg_0.2_sub10_scaffold_188_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17589..18539)
DNA (951bp) protein (317aa)
Peptidase M23B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH9_THICR
peptidase M23B Tax=CG_Thiomicrospira_01
peptidase M23B
cg_0.2_sub10_scaffold_188_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18589..19659)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CG_Thiomicrospira_01
3-isopropylmalate dehydrogenase (EC:1.1.1.85) rbh
3-isopropylmalate dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LEU3_THICR rbh
cg_0.2_sub10_scaffold_188_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19729..20373)
DNA (645bp) protein (215aa)
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33); K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Thiomicrospira_01
leuD; isopropylmalate isomerase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI1_THICR
cg_0.2_sub10_scaffold_188_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20389..21813)
DNA (1425bp) protein (475aa)
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=CG_Thiomicrospira_01
isopropylmalate isomerase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LEUC_THICR rbh
cg_0.2_sub10_scaffold_188_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22000..22653
DNA (654bp) protein (218aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI3_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_188_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22664..23974)
DNA (1311bp) protein (437aa)
peptidase S13, D-Ala-D-Ala carboxypeptidase C; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] Tax=CG_Thiomicrospira
D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI4_THICR
peptidase S13, D-Ala-D-Ala carboxypeptidase C
cg_0.2_sub10_scaffold_188_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24147..24800
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI5_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_188_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24803..25501
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HI6_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_188_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25628..26935
DNA (1308bp) protein (436aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.6); K12267 peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] Tax=CG_Thiomicrospira_01
peptide methionine sulfoxide reductase (EC:1.8.4.11 1.8.4.6)
Peptide methionine sulfoxide reductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HJ4_THICR
cg_0.2_sub10_scaffold_188_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27174..29690)
DNA (2517bp) protein (839aa)
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] Tax=CG_Thiomicrospira_01
ATP-dependent helicase HrpB n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBH6_THICA
ATP-dependent helicase HrpB
cg_0.2_sub10_scaffold_188_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29872..33036)
DNA (3165bp) protein (1055aa)
HD-domain containing protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T270_9GAMM
metal dependent phosphohydrolase Tax=CG_Thiomicrospira_01
metal dependent phosphohydrolase
cg_0.2_sub10_scaffold_188_c_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33479..34852)
DNA (1374bp) protein (458aa)
Diguanylate cyclase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CNT5_THEYO
diguanylate cyclase with PAS/PAC sensor Tax=CG_Thiomicrospira_01
diguanylate cyclase/phosphodiesterase
Displaying 29 items

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