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cg_0.2_sub10_scaffold_533_c

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_533_c_1
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
transposase
Transposase {ECO:0000313|EMBL:AJF05951.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterran
Transposase, IS4 family id=4526726 bin=GWC2_Pelobacter_58_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
cg_0.2_sub10_scaffold_533_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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796..1497
DNA (702bp) protein (234aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GC5_THICR
two component transcriptional regulator; K02483 two-component system, OmpR family, response regulator Tax=CG_Thiomicrospira_01
two component transcriptional regulator
cg_0.2_sub10_scaffold_533_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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1556..3142
DNA (1587bp) protein (529aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GC6_THICR
periplasmic sensor signal transduction histidine kinase Tax=CG_Thiomicrospira_01
periplasmic sensor signal transduction histidine kinase
cg_0.2_sub10_scaffold_533_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3111..3830)
DNA (720bp) protein (240aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=CG_Thiomicrospira_01
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=PYRF_THICR rbh
cg_0.2_sub10_scaffold_533_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3845..4195)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=2 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GC8_THICR
hypothetical protein; K08992 putative membrane protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_533_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4259..4564)
DNA (306bp) protein (102aa)
Integration host factor subunit beta n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GC9_THICR
integration host factor subunit beta; K05788 integration host factor subunit beta Tax=CG_Thiomicrospira_01
integration host factor subunit beta
cg_0.2_sub10_scaffold_533_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4686..6401)
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD0_THICR
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=CG_Thiomicrospira_01
rpsA; 30S ribosomal protein S1
cg_0.2_sub10_scaffold_533_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6595..7263)
DNA (669bp) protein (223aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Thiomicrospira_01
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD1_THICR
cg_0.2_sub10_scaffold_533_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7274..8623)
DNA (1350bp) protein (450aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=CG_Thiomicrospira_01
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=AROA_THICR rbh
cg_0.2_sub10_scaffold_533_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8658..9533)
DNA (876bp) protein (292aa)
prephenate dehydrogenase (EC:1.3.1.12); K00210 prephenate dehydrogenase [EC:1.3.1.12] Tax=CG_Thiomicrospira_01
prephenate dehydrogenase (EC:1.3.1.12) rbh
Prephenate dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD3_THICR
cg_0.2_sub10_scaffold_533_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9518..10633)
DNA (1116bp) protein (372aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_Thiomicrospira_01
Histidinol-phosphate aminotransferase 2 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=HIS82_THICR rbh
histidinol-phosphate aminotransferase
cg_0.2_sub10_scaffold_533_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10714..11814)
DNA (1101bp) protein (367aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] Tax=CG_Thiomicrospira_01
Chorismate mutase / prephenate dehydratase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD5_THICR
chorismate mutase
cg_0.2_sub10_scaffold_533_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11852..12916)
DNA (1065bp) protein (355aa)
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] Tax=CG_Thiomicrospira_01
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD6_THICR
cg_0.2_sub10_scaffold_533_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12937..15552)
DNA (2616bp) protein (872aa)
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Thiomicrospira_01
DNA gyrase subunit A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD7_THICR
DNA gyrase subunit A
cg_0.2_sub10_scaffold_533_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15876..16622
DNA (747bp) protein (249aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] Tax=CG_Thiomicrospira_01
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=UBIG_THICR rbh
cg_0.2_sub10_scaffold_533_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16658..17317
DNA (660bp) protein (220aa)
HAD family hydrolase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18] Tax=CG_Thiomicrospira_01
HAD family hydrolase (EC:3.1.3.18)
Phosphoglycolate phosphatase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GD9_THICR
cg_0.2_sub10_scaffold_533_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17314..18024
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase homolog n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GE0_THICR
short-chain dehydrogenase Tax=CG_Thiomicrospira_01
short-chain dehydrogenase
cg_0.2_sub10_scaffold_533_c_18

Not on your lists

18134..18871
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI00037AEA24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR03557.1}; Flags: Fragment;; TaxID=1618962 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_13b.;"
Displaying 18 items

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