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cg_0.2_sub10_scaffold_398_c

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub10_scaffold_398_c_1
unknown

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2..127
DNA (126bp) protein (42aa)

This feature has no annotations

cg_0.2_sub10_scaffold_398_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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437..1699
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GR1_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_398_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1785..2099)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00037770EB
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_398_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2272..3723
DNA (1452bp) protein (484aa)
deoxyribodipyrimidine photolyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] Tax=CG_Thiomicrospira_01
deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase type I n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ9_THICR
cg_0.2_sub10_scaffold_398_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3733..4602
DNA (870bp) protein (290aa)
Transcriptional regulator, MerR family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ8_THICR
MerR family transcriptional regulator Tax=CG_Thiomicrospira_01
MerR family transcriptional regulator
cg_0.2_sub10_scaffold_398_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4595..5044)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003717C01
PAS sensor protein Tax=CG_Thiomicrospira_01
PAS sensor protein
cg_0.2_sub10_scaffold_398_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6108
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ7_THICR
hypothetical protein; K03796 Bax protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub10_scaffold_398_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6122..6643
DNA (522bp) protein (174aa)
S-ribosylhomocysteinase; K07173 S-ribosylhomocysteine lyase [EC:4.4.1.21] Tax=CG_Thiomicrospira_01
S-ribosylhomocysteine lyase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LUXS_THICR rbh
S-ribosylhomocysteinase
cg_0.2_sub10_scaffold_398_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6649..7359
DNA (711bp) protein (237aa)
adenosylhomocysteine nucleosidase (EC:3.2.2.9); K01243 S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase [EC:3.2.2.9] Tax=CG_Thiomicrospira_01
adenosylhomocysteine nucleosidase (EC:3.2.2.9)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=MTNN_THICR rbh
cg_0.2_sub10_scaffold_398_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7412..8914)
DNA (1503bp) protein (501aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ4_THICR
diguanylate cyclase/phosphodiesterase Tax=CG_Thiomicrospira_01
diguanylate cyclase/phosphodiesterase
cg_0.2_sub10_scaffold_398_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9083..10264
DNA (1182bp) protein (394aa)
purT; phosphoribosylglycinamide formyltransferase 2; K08289 phosphoribosylglycinamide formyltransferase 2 [EC:2.1.2.2] Tax=CG_Thiomicrospira_01
Phosphoribosylglycinamide formyltransferase 2 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=PURT_THICR rbh
purT; phosphoribosylglycinamide formyltransferase 2
cg_0.2_sub10_scaffold_398_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10636..11070
DNA (435bp) protein (145aa)
Flagellar protein FliS n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ2_THICR
flagellar protein FliS; K02422 flagellar protein FliS Tax=CG_Thiomicrospira_01
flagellar protein FliS
cg_0.2_sub10_scaffold_398_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11335..12225
DNA (891bp) protein (297aa)
RNA polymerase sigma factor n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ1_THICR
sigma 32 (RpoH); K03089 RNA polymerase sigma-32 factor Tax=CG_Thiomicrospira_01
sigma 32 (RpoH)
cg_0.2_sub10_scaffold_398_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12320..13213)
DNA (894bp) protein (298aa)
aldose 1-epimerase; K01792 glucose-6-phosphate 1-epimerase [EC:5.1.3.15] Tax=CG_Thiomicrospira_01
Aldose 1-epimerase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DQ0_THICR
aldose 1-epimerase
cg_0.2_sub10_scaffold_398_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13243..14331)
DNA (1089bp) protein (363aa)
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4] Tax=CG_Thiomicrospira_01
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=AROB_THICR rbh
cg_0.2_sub10_scaffold_398_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14367..14891)
DNA (525bp) protein (175aa)
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71] Tax=CG_Thiomicrospira_01
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=AROK_THICR rbh
cg_0.2_sub10_scaffold_398_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15020..15637
DNA (618bp) protein (206aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8] Tax=CG_Thiomicrospira_01
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=KGUA_THICR rbh
cg_0.2_sub10_scaffold_398_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15656..16840
DNA (1185bp) protein (395aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DP6_THICR
DegT/DnrJ/EryC1/StrS aminotransferase Tax=CG_Thiomicrospira_01
DegT/DnrJ/EryC1/StrS aminotransferase
cg_0.2_sub10_scaffold_398_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16874..17947
DNA (1074bp) protein (358aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DP5_THICR
iron-containing alcohol dehydrogenase Tax=CG_Thiomicrospira_01
iron-containing alcohol dehydrogenase rbh
cg_0.2_sub10_scaffold_398_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17957..18703
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=CG_Thiomicrospira_01
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase 2 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=KDSB2_THICR rbh
cg_0.2_sub10_scaffold_398_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18720..20003
DNA (1284bp) protein (428aa)
3-deoxy-D-manno-octulosonic-acid transferase; K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=CG_Thiomicrospira_01
3-deoxy-D-manno-octulosonic-acid transferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DP3_THICR
3-deoxy-D-manno-octulosonic-acid transferase
cg_0.2_sub10_scaffold_398_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20103..20327
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=CG_Thiomicrospira_01
DNA-directed RNA polymerase subunit omega n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RPOZ_THICR rbh
DNA-directed RNA polymerase subunit omega
cg_0.2_sub10_scaffold_398_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20352..22508
DNA (2157bp) protein (719aa)
(p)ppGpp synthetase SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=CG_Thiomicrospira_01
(p)ppGpp synthetase SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31DP1_THICR
Displaying 23 items

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