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cg_0.2_sub100_scaffold_59_c

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub100_scaffold_59_c_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..212
DNA (210bp) protein (70aa)
UPF0345 protein Tcr_1534 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Y1534_THICR rbh
hypothetical protein; K09913 hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_59_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292..3435)
DNA (3144bp) protein (1048aa)
Resistance-Nodulation-Cell Division (RND) superfamily cation efflux transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FE9_THICR
hydrophobe/amphiphile efflux-1 HAE1; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CG_Thiomicrospira_01
hydrophobe/amphiphile efflux-1 HAE1
cg_0.2_sub100_scaffold_59_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3435..4613)
DNA (1179bp) protein (393aa)
RND membrane fusion protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FF0_THICR
secretion protein HlyD; K03585 membrane fusion protein Tax=CG_Thiomicrospira_01
secretion protein HlyD
cg_0.2_sub100_scaffold_59_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4769..5773)
DNA (1005bp) protein (335aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=CG_Thiomicrospira_01
tryptophanyl-tRNA synthetase (EC:6.1.1.2) rbh
Tryptophan--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FF1_THICR
cg_0.2_sub100_scaffold_59_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5881..7290)
DNA (1410bp) protein (470aa)
M48 family peptidase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I22_THICR
peptidase M48, Ste24p Tax=CG_Thiomicrospira_01
peptidase M48, Ste24p
cg_0.2_sub100_scaffold_59_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7372..7611
DNA (240bp) protein (80aa)
SirA homolog n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I21_THICR
SirA-like protein Tax=CG_Thiomicrospira_01
SirA-like protein
cg_0.2_sub100_scaffold_59_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7879..8763
DNA (885bp) protein (295aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=CG_Thiomicrospira_01
UDP-glucose pyrophosphorylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I20_THICR
UTP-glucose-1-phosphate uridylyltransferase
cg_0.2_sub100_scaffold_59_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8842..10473
DNA (1632bp) protein (544aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=CG_Thiomicrospira_01
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=G6PI_THICR rbh
cg_0.2_sub100_scaffold_59_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10470..11780
DNA (1311bp) protein (437aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=CG_Thiomicrospira_01
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I18_THICR
cg_0.2_sub100_scaffold_59_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12048..12890
DNA (843bp) protein (281aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=CG_Thiomicrospira_01
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8) rbh
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I17_THICR
cg_0.2_sub100_scaffold_59_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12905..14452
DNA (1548bp) protein (516aa)
2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] Tax=CG_Thiomicrospira_01
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase 1 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LEU11_THICR rbh
cg_0.2_sub100_scaffold_59_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14456..15034
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I15_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_59_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15050..15550
DNA (501bp) protein (167aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=CG_Thiomicrospira_01
SSU ribosomal protein S18P alanine acetyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I14_THICR
ribosomal-protein-alanine acetyltransferase
cg_0.2_sub100_scaffold_59_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15570..16367)
DNA (798bp) protein (266aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=CG_Thiomicrospira_01
Inositol monophosphatase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I13_THICR
inositol monophosphatase
cg_0.2_sub100_scaffold_59_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16466..17266
DNA (801bp) protein (267aa)
RNA methyl transferase TrmH; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-] Tax=CG_Thiomicrospira_01
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I12_THICR
RNA methyl transferase TrmH
cg_0.2_sub100_scaffold_59_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17250..18050
DNA (801bp) protein (267aa)
serine O-acetyltransferase (EC:2.3.1.30); K00640 serine O-acetyltransferase [EC:2.3.1.30] Tax=CG_Thiomicrospira_01
serine O-acetyltransferase (EC:2.3.1.30)
Serine acetyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I11_THICR
cg_0.2_sub100_scaffold_59_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18156..18593
DNA (438bp) protein (146aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I10_THICR
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor Tax=CG_Thiomicrospira_01
BadM/Rrf2 family transcriptional regulator
cg_0.2_sub100_scaffold_59_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18617..18943
DNA (327bp) protein (109aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I09_THICR
HesB/YadR/YfhF; K13628 iron-sulfur cluster assembly protein Tax=CG_Thiomicrospira_01
HesB/YadR/YfhF
cg_0.2_sub100_scaffold_59_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19131..19559
DNA (429bp) protein (143aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] Tax=CG_Thiomicrospira_01
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=NDK_THICR rbh
cg_0.2_sub100_scaffold_59_c_20
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19567..20727
DNA (1161bp) protein (387aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=CG_Thiomicrospira_01
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RLMN_THICR rbh
hypothetical protein
cg_0.2_sub100_scaffold_59_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20720..21142
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I06_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_59_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21184..22476
DNA (1293bp) protein (431aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Thiomicrospira_01
histidyl-tRNA synthetase (EC:6.1.1.21) rbh
Histidine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYH_THICR rbh
cg_0.2_sub100_scaffold_59_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22513..23154
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I04_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_59_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23171..24427
DNA (1257bp) protein (419aa)
Outer membrane protein assembly factor BamB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I03_THICR
Pyrrolo-quinoline quinone Tax=CG_Thiomicrospira_01
Pyrrolo-quinoline quinone
cg_0.2_sub100_scaffold_59_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24424..25872
DNA (1449bp) protein (483aa)
GTPase Der n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I02_THICR
small GTP-binding protein domain-containing protein; K03977 GTP-binding protein Tax=CG_Thiomicrospira_01
small GTP-binding protein domain-containing protein
cg_0.2_sub100_scaffold_59_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25874..27313)
DNA (1440bp) protein (480aa)
FAD-linked oxidoreductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31I01_THICR
hypothetical protein; K06911 Tax=CG_Thiomicrospira_01
hypothetical protein
Displaying 26 items

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