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cg_0.2_sub100_scaffold_23_c

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub100_scaffold_23_c_trna_1
unknown

Not on your lists

30..118
DNA (89bp)
transferRNA
cg_0.2_sub100_scaffold_23_c_1
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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505..768
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RS20_THICR rbh
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=CG_Thiomicrospira_01
30S ribosomal protein S20
cg_0.2_sub100_scaffold_23_c_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

959..2467
DNA (1509bp) protein (503aa)
Multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) flippase superfamily protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31ID4_THICR
integral membrane protein MviN; K03980 virulence factor Tax=CG_Thiomicrospira_01
integral membrane protein MviN
cg_0.2_sub100_scaffold_23_c_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2519..3382)
DNA (864bp) protein (288aa)
Hsp33 protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F32_THICR
heat shock protein 33; K04083 molecular chaperone Hsp33 Tax=CG_Thiomicrospira_01
heat shock protein 33 rbh
cg_0.2_sub100_scaffold_23_c_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3392..4396)
DNA (1005bp) protein (335aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=CG_Thiomicrospira_01
lipoyl synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=UPI00005D767A
lipoyl synthase
cg_0.2_sub100_scaffold_23_c_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4430..5068)
DNA (639bp) protein (213aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=CG_Thiomicrospira_01
Octanoyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LIPB_THICR rbh
lipoate-protein ligase B
cg_0.2_sub100_scaffold_23_c_6
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5077..5355)
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F44_THICR
hypothetical protein; K09158 hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_23_c_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5364..6245)
DNA (882bp) protein (294aa)
aminotransferase, class IV; K00824 D-alanine transaminase [EC:2.6.1.21] Tax=CG_Thiomicrospira_01
D-amino acid aminotransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F45_THICR
aminotransferase, class IV
cg_0.2_sub100_scaffold_23_c_8
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6251..7441)
DNA (1191bp) protein (397aa)
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=CG_Thiomicrospira_01
Serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Penicillin-binding protein 6. Serine peptidase. MEROPS family S11 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F46_THICR
cg_0.2_sub100_scaffold_23_c_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7549..8679)
DNA (1131bp) protein (377aa)
Rod shape-determining protein RodA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F47_THICR
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Thiomicrospira_01
rod shape-determining protein RodA
cg_0.2_sub100_scaffold_23_c_10
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8669..10486)
DNA (1818bp) protein (606aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K05515 penicillin-binding protein 2 Tax=CG_Thiomicrospira_01
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F48_THICR
cg_0.2_sub100_scaffold_23_c_11
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10490..10993)
DNA (504bp) protein (168aa)
Rod shape-determining protein MreD n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F49_THICR
hypothetical protein; K03571 rod shape-determining protein MreD Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_23_c_12
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10986..11747)
DNA (762bp) protein (254aa)
Cell shape-determining protein MreC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F50_THICR
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=CG_Thiomicrospira_01
rod shape-determining protein MreC
cg_0.2_sub100_scaffold_23_c_13
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11882..12928)
DNA (1047bp) protein (349aa)
Rod shape-determining protein MreB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F51_THICR
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=CG_Thiomicrospira_01
rod shape-determining protein MreB
cg_0.2_sub100_scaffold_23_c_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13227..13493
DNA (267bp) protein (89aa)
Competence protein ComEA helix-hairpin-helix family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F08_THICR
competence protein ComEA helix-hairpin-helix region; K02237 competence protein ComEA Tax=CG_Thiomicrospira_01
competence protein ComEA helix-hairpin-helix region
cg_0.2_sub100_scaffold_23_c_15
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13523..14347
DNA (825bp) protein (275aa)
DNA ligase (EC:6.5.1.1); K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=CG_Thiomicrospira_01
DNA ligase (EC:6.5.1.1)
ATP dependent DNA ligase, central n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F09_THICR
cg_0.2_sub100_scaffold_23_c_16
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14454..15101)
DNA (648bp) protein (216aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=CG_Thiomicrospira_01
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F10_THICR
cg_0.2_sub100_scaffold_23_c_17
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15353..16228
DNA (876bp) protein (292aa)
Putative signal transduction protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F12_THICR
signal transduction protein Tax=CG_Thiomicrospira_01
signal transduction protein
cg_0.2_sub100_scaffold_23_c_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16351..18279
DNA (1929bp) protein (643aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Thiomicrospira_01
Threonine--tRNA ligase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYT_THICR rbh
threonyl-tRNA synthetase
cg_0.2_sub100_scaffold_23_c_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18524..18862
DNA (339bp) protein (113aa)
Bacterial translation initiation factor 3 (BIF-3) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F15_THICR
initiation factor 3; K02520 translation initiation factor IF-3 Tax=CG_Thiomicrospira_01
initiation factor 3
cg_0.2_sub100_scaffold_23_c_20
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19098..19295
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL35_THICR rbh
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicr
cg_0.2_sub100_scaffold_23_c_21
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19308..19664
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL20_THICR rbh
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_Thiomicrospira_01
rplT; 50S ribosomal protein L20
cg_0.2_sub100_scaffold_23_c_22
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19899..20897
DNA (999bp) protein (333aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Thiomicrospira_01
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYFA_THICR rbh
cg_0.2_sub100_scaffold_23_c_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20922..23303
DNA (2382bp) protein (794aa)
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Thiomicrospira_01
phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=SYFB_THICR rbh
cg_0.2_sub100_scaffold_23_c_24
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23343..23636
DNA (294bp) protein (98aa)
Integration host factor subunit alpha n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=IHFA_THICR rbh
integration host factor subunit alpha; K04764 integration host factor subunit alpha Tax=CG_Thiomicrospira_01
integration host factor subunit alpha
cg_0.2_sub100_scaffold_23_c_25
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23623..24003
DNA (381bp) protein (127aa)
Transcriptional regulator, MerR family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F21_THICR
MerR family transcriptional regulator Tax=CG_Thiomicrospira_01
MerR family transcriptional regulator
cg_0.2_sub100_scaffold_23_c_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24005..24604)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F22_THICR
hypothetical protein Tax=CG_Thiomicrospira_01
hypothetical protein
cg_0.2_sub100_scaffold_23_c_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24617..25471)
DNA (855bp) protein (285aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41); K01525 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] Tax=CG_Thiomicrospira_01
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Calcineurin-like phosphoesterase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F23_THICR
cg_0.2_sub100_scaffold_23_c_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25475..26272)
DNA (798bp) protein (266aa)
dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=CG_Thiomicrospira_01
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RSMA_THICR rbh
dimethyladenosine transferase
cg_0.2_sub100_scaffold_23_c_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26253..27275)
DNA (1023bp) protein (341aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=CG_Thiomicrospira_01
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F25_THICR
Displaying items 1-30 of 40 in total

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