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cg_0.2_sub100_scaffold_94_c

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg_0.2_sub100_scaffold_94_c_1
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=CG_Mariprof_05
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI000367EA33
cg_0.2_sub100_scaffold_94_c_2
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..2126)
DNA (1722bp) protein (574aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=CG_Mariprof_05
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F058_9PROT
cg_0.2_sub100_scaffold_94_c_trna_1
unknown

Not on your lists

2238..2310
DNA (73bp)
transferRNA
cg_0.2_sub100_scaffold_94_c_trna_2
unknown

Not on your lists

2407..2478
DNA (72bp)
transferRNA
cg_0.2_sub100_scaffold_94_c_trna_3
unknown

Not on your lists

2521..2604
DNA (84bp)
transferRNA
cg_0.2_sub100_scaffold_94_c_3
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2844..4532
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036238DF
signal transduction family protein (GGDEF domain-containing protein) Tax=CG_Mariprof_05
signal transduction family protein (GGDEF domain-containing protein)
cg_0.2_sub100_scaffold_94_c_4
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4640..4984
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003792984
ferredoxin; K05524 ferredoxin Tax=CG_Mariprof_05
ferredoxin
cg_0.2_sub100_scaffold_94_c_5
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5053..6126
DNA (1074bp) protein (358aa)
radical SAM protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=CG_Mariprof_05
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI0003666E3D
radical SAM protein
cg_0.2_sub100_scaffold_94_c_6
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6123..7046
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Mariprofundus ferrooxydans RepID=UPI00035C134C
ADP-heptose synthase Tax=CG_Mariprof_05
ADP-heptose synthase
cg_0.2_sub100_scaffold_94_c_7
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7062..7802
DNA (741bp) protein (247aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=CG_Mariprof_05
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI000373C3E2
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
cg_0.2_sub100_scaffold_94_c_8
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7799..8530)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00035EFC94
ABC-3 protein; K02075 zinc/manganese transport system permease protein Tax=CG_Mariprof_05
ABC-3 protein
cg_0.2_sub100_scaffold_94_c_9
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8533..9438)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00036DEDD1
znuA; ABC transporter periplasmic substrate binding protein; K02077 zinc/manganese transport system substrate-binding protein Tax=CG_Mariprof_05
znuA; ABC transporter periplasmic substrate binding protein
cg_0.2_sub100_scaffold_94_c_10
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9468..10562)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000369D102
hypothetical protein Tax=CG_Mariprof_05
cg_0.2_sub100_scaffold_94_c_11
unknown

Not on your lists

comp(10725..10982)
DNA (258bp) protein (86aa)

This feature has no annotations

cg_0.2_sub100_scaffold_94_c_12
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11029..11772
DNA (744bp) protein (248aa)
Channel protein, hemolysin III family n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BTA9_9FLAO
hemolysin-3 family protein; K11068 hemolysin III Tax=CG_Mariprof_05
hemolysin-3 family protein
cg_0.2_sub100_scaffold_94_c_13
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11818..13386
DNA (1569bp) protein (523aa)
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-] Tax=CG_Mariprof_05
DNA topoisomerase IV subunit A n=1 Tax=Mycoplasma penetrans (strain HF-2) RepID=Q8EVB9_MYCPE
DNA topoisomerase IV subunit A
cg_0.2_sub100_scaffold_94_c_14
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13418..16057
DNA (2640bp) protein (880aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Mariprof_05
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00037879A3
valS; valyl-tRNA ligase
cg_0.2_sub100_scaffold_94_c_15
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16073..16591
DNA (519bp) protein (173aa)
Small-conductance mechanosensitive channel n=1 Tax=gamma proteobacterium IMCC1989 RepID=F3LJ56_9GAMM
hypothetical protein Tax=CG_Mariprof_05
hypothetical protein
cg_0.2_sub100_scaffold_94_c_16
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16620..17168
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM79 RepID=J3IFM0_9PSED
integron gene cassette protein Tax=CG_Mariprof_05
integron gene cassette protein
cg_0.2_sub100_scaffold_94_c_17
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17286..18224
DNA (939bp) protein (313aa)
psd; phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=CG_Mariprof_05
phosphatidylserine decarboxylase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00037E8F9D
psd; phosphatidylserine decarboxylase
cg_0.2_sub100_scaffold_94_c_18
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18239..18814)
DNA (576bp) protein (192aa)
Tax=CG_Mariprof_05
cg_0.2_sub100_scaffold_94_c_19
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18811..19494)
DNA (684bp) protein (228aa)
id=4400834 Tax=CG_Mariprof_05
id=4400834 bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
Displaying 22 items

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