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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_1
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

1..948
DNA (948bp) protein (316aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FE435
DNA-directed RNA polymerase subunit alpha
Tax=RBG_13_RIF_OD1_07_36_15_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_2
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists


1121..1471
DNA (351bp) protein (117aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
LSU ribosomal protein L17P
Tax=CG_CPR10_03
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_3

Not on your lists


1585..2013
DNA (429bp) protein (143aa)
Marine sediment metagenome DNA, contig: S01H1_S25787 {ECO:0000313|EMBL:GAG37054.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
50S ribosomal protein L13 bin=GWA1_ZB2_49_26 species=Desulfovibrio vulgaris genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rplM; ribosomal protein L13
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_4

Not on your lists


2329..2679
DNA (351bp) protein (117aa)
30S ribosomal protein S9 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
Marine sediment metagenome DNA, contig: S06H3_C01522 {ECO:0000313|EMBL:GAH97196.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S9
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

2865..3149
DNA (285bp) protein (95aa)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_6

Not on your lists

3656..4342
DNA (687bp) protein (229aa)
hypothetical protein, partial Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380BD1E
Uncharacterized protein {ECO:0000313|EMBL:KKO02911.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_7
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(5808..7226)
DNA (1419bp) protein (473aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003798341
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_8
R_RIF_OD107_43_32, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

7653..8924
DNA (1272bp) protein (424aa)
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase bin=GWA1_ZB2_49_26 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPLOWO2_01_FULL_RIF_OD107_43_32_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_9
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

9036..10043
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370B3FC
MreB/Mrl family cell shape determining protein
Tax=CG_CPR10_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_10
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

10202..11278
DNA (1077bp) protein (359aa)
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003616D88
Tax=CG_CPR10_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_11
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

11281..11835
DNA (555bp) protein (185aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000375F470
ribosome recycling factor
Tax=CG_CPR10_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_12
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

11997..13082
DNA (1086bp) protein (362aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000361B477
membrane-associated zinc metalloprotease
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_13
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


13150..14397
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363620D
proS; prolyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_14
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

14409..15461
DNA (1053bp) protein (351aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037AFFFA
mreB; cell shape-determining protein MreB
Tax=CG_CPR10_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_15
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

15555..15842
DNA (288bp) protein (96aa)
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036E67FD
Tax=RBG_13_RIF_OD1_07_38_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_16
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

16113..17645
DNA (1533bp) protein (511aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000363B069
Tax=CG_CPR10_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_17
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

17649..18161
DNA (513bp) protein (171aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003744795
Tax=RBG_13_RIF_OD1_07_42_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_trna_1
unknown

Not on your lists

18724..18796
DNA (73bp)
transferRNA Met
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_18
GWB1_OD1_42_17, Azambacteria, Parcubacteria, Bacteria

Not on your lists

18920..19582
DNA (663bp) protein (221aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2FF41_9BACT
Intein-containing protein {ECO:0000313|EMBL:KKS43726.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWB1_42_17.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_trna_2
unknown

Not on your lists

19593..19668
DNA (76bp)
transferRNA Asp
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_19
unknown

Not on your lists

19728..20192
DNA (465bp) protein (155aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_20
unknown

Not on your lists

20205..20459
DNA (255bp) protein (85aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_21
unknown

Not on your lists

20581..20883
DNA (303bp) protein (101aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3068_c_22
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


21127..21486
DNA (360bp) protein (120aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000370918B
phenylalanyl-tRNA synthetase, alpha subunit
Tax=RBG_13_RIF_OD1_07_42_11_curated
Displaying 24 items

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