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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_1

Not on your lists

comp(2..1303)
DNA (1302bp) protein (434aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CFC48
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000313|EMBL:KKS26162.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1385..2191)
DNA (807bp) protein (269aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037D3E62
short-chain dehydrogenase/reductase family oxidoreductase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_3
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

2588..4603
DNA (2016bp) protein (672aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035DC2DE
UvrABC system protein B
Tax=RBG_13_RIF_OD1_07_38_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_4
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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4729..4992
DNA (264bp) protein (88aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371EFDE
SSU ribosomal protein S20P
Tax=RBG_13_RIF_OD1_07_36_15_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_5
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(4989..5924)
DNA (936bp) protein (312aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00038015F3
DNA polymerase III subunit delta
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_6

Not on your lists

comp(5966..6841)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036A1C0A
Uncharacterized protein {ECO:0000313|EMBL:KKN97100.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
formamidopyrimidine-DNA glycosylase Fpg
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_7

Not on your lists

comp(7114..7482)
DNA (369bp) protein (123aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003622DB7
Marine sediment metagenome DNA, contig: S06H3_L02931 {ECO:0000313|EMBL:GAI06642.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_8
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

comp(7586..7957)
DNA (372bp) protein (124aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036C15E0
response regulator receiver protein
Tax=CG_CPR10_03
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_9
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(8052..9608)
DNA (1557bp) protein (519aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CF78F
multi-sensor signal transduction histidine kinase
Tax=RBG_13_RIF_OD1_07_38_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_10
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(9602..10207)
DNA (606bp) protein (202aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_11
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(10212..10811)
DNA (600bp) protein (200aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_12
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(10816..11418)
DNA (603bp) protein (201aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_13
GWA2_RIF_OD1_07_46_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(11423..12109)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=GWA2_RIF_OD1_07_46_15_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_14
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(12275..12682)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_15
unknown

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comp(12744..12869)
DNA (126bp) protein (42aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_16
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(12982..13599)
DNA (618bp) protein (206aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_17
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(13593..14261)
DNA (669bp) protein (223aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037B26DA
Tax=RBG_13_RIF_OD1_07_37_56_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_18
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(14554..15438)
DNA (885bp) protein (295aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CCD0D
Tax=RBG_13_RIF_OD1_07_38_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_19

Not on your lists

comp(15449..16342)
DNA (894bp) protein (298aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E6F9E
Uncharacterized protein {ECO:0000313|EMBL:KKN97108.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_20
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(16348..17235)
DNA (888bp) protein (296aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E6F9E
putative PAS/PAC sensor protein
Tax=RBG_13_RIF_OD1_07_42_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_21
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists

comp(17241..18122)
DNA (882bp) protein (294aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037E6F9E
Tax=CG_CPR01_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_22

Not on your lists

comp(18133..19044)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035E28E1
Uncharacterized protein {ECO:0000313|EMBL:KKN97110.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DNA polymerase I
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_23

Not on your lists

comp(19240..19818)
DNA (579bp) protein (193aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN97111.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_24

Not on your lists

20112..21422
DNA (1311bp) protein (437aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037D32EB
Uncharacterized protein {ECO:0000313|EMBL:KKN97112.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
general secretion pathway protein E (Type II traffic warden ATPase)(Cholera toxin secretion protein EpsE)
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_867_c_25
unknown

Not on your lists

21456..21662
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 25 items

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