ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_1
R_OD1_Falkowbacteria_42_9, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(115..729)
DNA (615bp) protein (205aa)
30S ribosomal protein S11 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
rpsK; 30S ribosomal protein S11
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_42_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_2
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(767..1159)
DNA (393bp) protein (131aa)
30S ribosomal protein S13 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S13
Tax=CG_Falkow_04
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_3
GWF2_OD1_43_32, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1335..1586)
DNA (252bp) protein (84aa)
Translation initiation factor IF-1 {ECO:0000313|EMBL:KKT13524.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_43_32.;"
Translation initiation factor IF-1 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
infA; translation initiation factor IF-1
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_4
CG_CPR01_01, CG_CPR01, Bacteria

Not on your lists


comp(1810..3675)
DNA (1866bp) protein (622aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=CG_CPR01_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_5
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3712..5676)
DNA (1965bp) protein (655aa)
id=2178745 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_6
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5743..8352)
DNA (2610bp) protein (870aa)
hypothetical protein bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
GDP-mannose 4,6 dehydratase ISS
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_7
GWF2_OD1_43_32, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8530..9720)
DNA (1191bp) protein (397aa)
Glycosyl transferase, group 1 Tax=uncultured bacterium RepID=K2FYX5_9BACT
Glycosyl transferase, group 1 {ECO:0000313|EMBL:KKT13215.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_43_32.;"
glycosyl transferase, group 1
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_8
GWF2_OD1_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

9874..10383
DNA (510bp) protein (170aa)
Transcription elongation factor GreA Tax=uncultured bacterium RepID=K2DNP8_9BACT
Transcription elongation factor greA {ECO:0000313|EMBL:KKR32635.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWF2_39_8.;"
transcription elongation factor GreA
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_9
unknown

Not on your lists

comp(10319..10516)
DNA (198bp) protein (66aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_trna_1
unknown

Not on your lists

comp(10460..10530)
DNA (71bp)
transferRNA Gln
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_10

Not on your lists

comp(10555..12150)
DNA (1596bp) protein (532aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
Polymerase III, subunit gamma and tau protein {ECO:0000313|EMBL:KKS32759.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
DNA polymerase III, subunits gamma and tau bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_11
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


comp(12255..12917)
DNA (663bp) protein (221aa)
50S ribosomal protein L7/L12 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L7/L12
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_12
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(13113..15653)
DNA (2541bp) protein (847aa)
hypothetical protein cdiviTM7_01505 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_13
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15708..16211)
DNA (504bp) protein (168aa)
id=2178744 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_14
GWA2_OD1_39_24, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

16386..17405
DNA (1020bp) protein (340aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2D713_9BACT
Mg/Co transporter {ECO:0000313|EMBL:KKR13584.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWA2_39_24.;"
Mg2+ and Co2+ transporter
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_15
unknown

Not on your lists

17457..18563
DNA (1107bp) protein (369aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_16
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18804..19850)
DNA (1047bp) protein (349aa)
tRNA-dihydrouridine synthase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
tRNA-U20-dihydrouridine synthase
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_17
CG_Falkow_04, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(19953..21353)
DNA (1401bp) protein (467aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Desulfococcus multivorans DSM 2059 RepID=S7U2T9_DESML
Tax=CG_Falkow_04
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_18
unknown

Not on your lists

21357..21503
DNA (147bp) protein (49aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_19
unknown

Not on your lists

comp(21581..21970)
DNA (390bp) protein (130aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_20
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21985..22887)
DNA (903bp) protein (301aa)
Cysteine synthase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
cysteine synthase
Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_21
GWA2_OD1_41_14_partial, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(22891..24198)
DNA (1308bp) protein (436aa)
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase {ECO:0000313|EMBL:KKR91782.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWA2_41_14.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(24226..26136)
DNA (1911bp) protein (637aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_23
unknown

Not on your lists

comp(26160..26483)
DNA (324bp) protein (108aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_24
R_OD1_48_14, Parcubacteria, Bacteria

Not on your lists

comp(26503..27423)
DNA (921bp) protein (307aa)
Ribosomal RNA small subunit methyltransferase H Tax=Chloroflexus RepID=RSMH_CHLAA
mraW; S-adenosyl-methyltransferase MraW
Tax=RIFCSPLOWO2_01_FULL_OD1_48_14_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_25
unknown

Not on your lists

comp(27437..27568)
DNA (132bp) protein (44aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_26
GWE2_OD1_38_254, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(27623..28054)
DNA (432bp) protein (144aa)
Protein MraZ bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Protein MraZ {ECO:0000313|EMBL:KKQ64720.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWE2_38_254.;"
MraZ protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_27
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(28698..29108)
DNA (411bp) protein (137aa)
Universal bacterial protein YeaZ Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WJA7_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CDB35829.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_28
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(29130..30467)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI0003749768
Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_322_c_29
unknown

Not on your lists

31453..31695
DNA (243bp) protein (81aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy