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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_1
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

comp(2..169)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88193.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_2
CG_Berkel_02, Berkelbacteria, Bacteria

Not on your lists

372..1055
DNA (684bp) protein (228aa)
Small-conductance mechanosensitive ion channel-like protein bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
Conserved TM helix
Tax=CG_Berkel_02
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_3
unknown

Not on your lists

1228..1419
DNA (192bp) protein (64aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_4
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2272..2847)
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZQM1_9FIRM
Contig000032, whole genome shotgun sequence {ECO:0000313|EMBL:KIS15664.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooepidemicus Sz4is.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_5
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

5020..5721
DNA (702bp) protein (234aa)
hypothetical protein Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003823F07
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KKP88413.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
dolichol-phosphate mannosyltransferase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_6
Campylobacter upsaliensis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5778..6362
DNA (585bp) protein (195aa)
Uncharacterized protein Tax=Campylobacter upsaliensis RM3195 RepID=Q4HNJ3_CAMUP
Uncharacterized protein {ECO:0000313|EMBL:EAL52333.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter upsaliensis RM3195.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_7
unknown

Not on your lists

6516..6776
DNA (261bp) protein (87aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_8
GWF2_OD1_38_76, Parcubacteria, Bacteria

Not on your lists

6780..7880
DNA (1101bp) protein (367aa)
DNA-methyltransferase (dcm) (EC:2.1.1.37)
Cytosine-specific methyltransferase Tax=Faecalibacterium sp. CAG:74 RepID=R7IHI2_9FIRM
Cytosine-specific methyltransferase {ECO:0000313|EMBL:KKQ82270.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_76.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_9
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

7943..9883
DNA (1941bp) protein (647aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88411.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
hypothetical protein bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_10
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

comp(9880..13314)
DNA (3435bp) protein (1145aa)
pth:PTH_2220 dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
Polymerase III alpha subunit protein {ECO:0000313|EMBL:KKP88410.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_11
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists


13476..13826
DNA (351bp) protein (117aa)
50S ribosomal protein L27 {ECO:0000313|EMBL:KKP88409.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
50S ribosomal protein L27 bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
50S ribosomal protein L27
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_12
unknown

Not on your lists

14082..14606
DNA (525bp) protein (175aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_13
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists


14937..15452
DNA (516bp) protein (172aa)
50S ribosomal protein L19 {ECO:0000313|EMBL:KKP88680.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
rplS; 50S ribosomal protein L19
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_14
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

15489..15755
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88681.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_15
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

15752..16123
DNA (372bp) protein (124aa)
UPF0102 protein Despr_2383 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RIU7_DESPD
Uncharacterized protein {ECO:0000313|EMBL:KKP88682.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_16
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

16264..17550
DNA (1287bp) protein (429aa)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKP88683.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
Glutamate--tRNA ligase bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
gltX_2; Glutamyl-or glutaminyl-tRNA synthetase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_17
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

17558..18739
DNA (1182bp) protein (394aa)
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKP88685.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
group 1 glycosyl transferase bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
group 1 glycosyl transferase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_18
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

18780..19469
DNA (690bp) protein (230aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88686.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
Uncharacterized protein bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_19
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

19567..21168
DNA (1602bp) protein (534aa)
CTP synthase (EC:6.3.4.2)
CTP synthase Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQR1_METIM
CTP synthase {ECO:0000313|EMBL:KKP88687.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_20
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

comp(21210..23015)
DNA (1806bp) protein (602aa)
VanW family protein {ECO:0000313|EMBL:KKP88688.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
Uncharacterized protein bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
von Willebrand factor A
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_21
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

23132..23785
DNA (654bp) protein (218aa)
Protein phosphatase 2C-related protein {ECO:0000313|EMBL:KKP88689.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_22
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

23823..24029
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP88690.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_23
GWA2_Berkelbacteria_35_9, Berkelbacteria, Bacteria

Not on your lists

24250..25086
DNA (837bp) protein (279aa)
Putative endonuclease 4 {ECO:0000313|EMBL:KKP88692.1}; species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA2_35_9.;"
Probable endonuclease 4 bin=GWE2_CPR3_35_7 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
nfo; Endonuclease IV
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_24
unknown

Not on your lists

25186..25740
DNA (555bp) protein (185aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_517_c_25
unknown

Not on your lists

25843..25920
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 25 items

View Taxonomy