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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_8764_c_1

Organism: CG23_combo_of_CG06-09_8_20_14_all_150_Jorgensenbacteria_OD1_54_14_curated

near complete RP 43 / 55 BSCG 46 / 51 ASCG 11 / 38
Location: 292..828

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor Tax=uncultured bacterium RepID=K1X2E9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 179.0
  • Bit_score: 161
  • Evalue 4.50e-37
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:KKT90820.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 175.0
  • Bit_score: 214
  • Evalue 1.10e-52
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 179.0
  • Bit_score: 139
  • Evalue 6.80e-31

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Taxonomy

GWA2_OD1_45_13 → Jorgensenbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGAGAGAAGACGAGCAAAAGCTCATTCAAAAAGCACAAGGGGGCAATAGGGAGGCCTTCGGGGTGCTCTACGACCACTACCTCCCGCAAATATACCGATTTGTGCTCCTCAAGGTGGGGCTGCGCGAAGATGCCGAAGACCTCACCCACCGCGTGTTTCTCTCCGCGTGGGAACACATCCGCCGCTACGAACACCGGGGGTTCCCCTTCTCATCCTGGCTCTACCGCATTGCGGGGAACGCGGTCATTGACCACTACCGCACCACACGCCACCATCAGAACATTGATGCGGTGCCGGAAGAGATGCTCGCCGAGGCGGACACCACCAGCGAAACCGTGGATACTGCCCTCTCAGCGCACCGGGTGCGCGCAGTGCTCCTCAAACTTGAACCCGATCAGCAAAGCGTGCTCATTATGAGGTTCATCAACGATCTCTCCAATAAAGAAATTGCGGAAGCGCTCGGGAAAACGGAGGGGGCCGTGCGGGTTATCCAGCACCGGGCCCTGAAACAGCTCAAGAAACTTGCCGATGTATAA
PROTEIN sequence
Length: 179
MREDEQKLIQKAQGGNREAFGVLYDHYLPQIYRFVLLKVGLREDAEDLTHRVFLSAWEHIRRYEHRGFPFSSWLYRIAGNAVIDHYRTTRHHQNIDAVPEEMLAEADTTSETVDTALSAHRVRAVLLKLEPDQQSVLIMRFINDLSNKEIAEALGKTEGAVRVIQHRALKQLKKLADV*