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cg2_3.0_scaffold_3956_c

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3956_c_1
CG_ACD39_01, ACD39, Bacteria

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1..294
DNA (294bp) protein (98aa)
HAMP domain-containing protein,cache domain-containing protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HG37_METFS
HAMP domain-containing protein,cache domain-containing protein Tax=CG_ACD39_01
HAMP domain-containing protein,cache domain-containing protein
cg2_3.0_scaffold_3956_c_2
CG_ACD39_01, ACD39, Bacteria

Not on your lists

287..1009
DNA (723bp) protein (241aa)
id=4467350 Tax=CG_ACD39_01
cg2_3.0_scaffold_3956_c_3
CG_ACD39_01, ACD39, Bacteria

Not on your lists

1060..1809
DNA (750bp) protein (250aa)
TPR repeat domain-containing protein Tax=CG_ACD39_01
TPR repeat domain-containing protein
cg2_3.0_scaffold_3956_c_4
CG_ACD39_01, ACD39, Bacteria

Not on your lists

1871..3550
DNA (1680bp) protein (560aa)
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=CG_ACD39_01
type II secretion system protein E (GspE)
cg2_3.0_scaffold_3956_c_5
CG_ACD39_01, ACD39, Bacteria

Not on your lists

3587..4792
DNA (1206bp) protein (402aa)
pilC; type 4 fimbrial assembly protein pilC Tax=CG_ACD39_01
pilC; type 4 fimbrial assembly protein pilC
cg2_3.0_scaffold_3956_c_6
CG_ACD39_01, ACD39, Bacteria

Not on your lists

4789..5526
DNA (738bp) protein (246aa)
glycosyl transferase family protein; K00786 [EC:2.4.-.-] Tax=CG_ACD39_01
glycosyl transferase family protein
cg2_3.0_scaffold_3956_c_7
CG_ACD39_01, ACD39, Bacteria

Not on your lists

5558..6013
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00037ADF32 rbh
hypothetical protein; K09153 hypothetical protein Tax=CG_ACD39_01
hypothetical protein
cg2_3.0_scaffold_3956_c_8
CG_ACD39_01, ACD39, Bacteria

Not on your lists

6030..6329
DNA (300bp) protein (100aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=CG_ACD39_01
hypothetical protein
cg2_3.0_scaffold_3956_c_9
CG_ACD39_01, ACD39, Bacteria

Not on your lists

comp(6389..8608)
DNA (2220bp) protein (740aa)
metal dependent phosphohydrolase Tax=CG_ACD39_01
metal dependent phosphohydrolase
cg2_3.0_scaffold_3956_c_10
CG_ACD39_01, ACD39, Bacteria

Not on your lists

comp(8601..11072)
DNA (2472bp) protein (824aa)
sensor diguanylate cyclase, GAF domain-containing Tax=CG_ACD39_01
sensor diguanylate cyclase, GAF domain-containing
cg2_3.0_scaffold_3956_c_11
CG_ACD39_01, ACD39, Bacteria

Not on your lists

comp(11078..13387)
DNA (2310bp) protein (770aa)
regulatory protein; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase) Tax=CG_ACD39_01
regulatory protein
cg2_3.0_scaffold_3956_c_12
CG_ACD39_01, ACD39, Bacteria

Not on your lists


13573..13872
DNA (300bp) protein (100aa)
Ribosomal protein S20 3..87 Tax=CG_ACD39_01
Ribosomal protein S20 3..87 id=46170 bin=ACD39 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=ACD39 organism_group=Unknown_CP organism_desc=unknown rbh
Displaying 12 items

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