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cg2_3.0_scaffold_2103_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_2103_c_1
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..443)
DNA (441bp) protein (147aa)
Peptidoglycan-binding LysM (Possible peptidase) n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDA6_9RHOB
Peptidase M23B {ECO:0000313|EMBL:KIC48529.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
Peptidoglycan-binding LysM (putative peptidase)
cg2_3.0_scaffold_2103_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(550..1197)
DNA (648bp) protein (216aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pcm-2; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDA7_9RHOB rbh
cg2_3.0_scaffold_2103_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1194..1979)
DNA (786bp) protein (262aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=314271 spec
5'-nucleotidase SurE n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDA8_9RHOB rbh
stationary phase survival protein SurE
cg2_3.0_scaffold_2103_c_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2100..2750)
DNA (651bp) protein (217aa)
Oxidoreductase, short-chain dehydrogenase/reductase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDA9_9RHOB rbh
Oxidoreductase, short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EAQ13495.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
Short-chain alcohol dehydrogenase of unknown specificity
cg2_3.0_scaffold_2103_c_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2912..3769)
DNA (858bp) protein (286aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDU1_9RHOB rbh
ksgA; dimethyladenosine transferase
cg2_3.0_scaffold_2103_c_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3766..4728)
DNA (963bp) protein (321aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDU2_9RHOB rbh
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase
cg2_3.0_scaffold_2103_c_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4728..5999)
DNA (1272bp) protein (424aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Mar
Probable PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDU3_9RHOB rbh
surA; peptidyl-prolyl cis-trans isomerase SurA
cg2_3.0_scaffold_2103_c_8
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6357..7130
DNA (774bp) protein (258aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VDU4_9RHOB
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=314271 speci
cg2_3.0_scaffold_2103_c_9
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7123..7824
DNA (702bp) protein (234aa)
Probable cytosol aminopeptidase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RYZ6_9RHOB rbh
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1417296 spec
leucyl aminopeptidase
cg2_3.0_scaffold_2103_c_10
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7833..8291
DNA (459bp) protein (153aa)
DNA polymerase III, chi subunit, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LQN6_RUEPO rbh
DNA polymerase III, chi subunit, putative
DNA polymerase III, chi subunit, putative {ECO:0000313|EMBL:AAV95706.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Rue
cg2_3.0_scaffold_2103_c_11
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8630..9754)
DNA (1125bp) protein (375aa)
Oxidoreductase domain protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BBD5_PARDP rbh
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABL72829.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus de
cg2_3.0_scaffold_2103_c_12

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comp(9764..10618)
DNA (855bp) protein (285aa)
D-tagatose 3-epimerase n=1 Tax=uncultured bacterium RepID=C6L1I3_9BACT rbh
D-tagatose 3-epimerase {ECO:0000313|EMBL:BAH90602.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
xylose isomerase domain-containing protein
cg2_3.0_scaffold_2103_c_13
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10621..11394)
DNA (774bp) protein (258aa)
ABC suger transport system, ATP-binding protein n=1 Tax=uncultured bacterium RepID=C6L1I4_9BACT rbh
putative ABC-type sugar transport system, ATPase component
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_2103_c_14
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11391..12398)
DNA (1008bp) protein (336aa)
ABC suger transport system, permease protein n=1 Tax=uncultured bacterium RepID=C6L1I5_9BACT rbh
rbsC; Ribose transport system permease protein rbsC
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_2103_c_15
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12495..13469)
DNA (975bp) protein (325aa)
ABC sugar transport system, periplasmic protein n=1 Tax=uncultured bacterium RepID=C6L1I6_9BACT rbh
putative ABC-type sugar transport system, periplasmic component
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_2103_c_16
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13499..14575)
DNA (1077bp) protein (359aa)
LacI family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6L1I7_9BACT rbh
transcriptional regulator
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_2103_c_17
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14681..15712
DNA (1032bp) protein (344aa)
Putative phosphoglycerate dehydrogenase n=1 Tax=uncultured bacterium RepID=C6L1I8_9BACT rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_2103_c_18
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16131..17009)
DNA (879bp) protein (293aa)
ABC-type dipeptide transport system periplasmic component n=1 Tax=Clostridium sp. CAG:58 RepID=R6RN03_9CLOT
Extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EYD76212.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;
dppA; dipeptide ABC transporter periplasmic protein
cg2_3.0_scaffold_2103_c_19
unknown

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17040..17645
DNA (606bp) protein (202aa)

This feature has no annotations

cg2_3.0_scaffold_2103_c_20
unknown

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17650..17838
DNA (189bp) protein (63aa)

This feature has no annotations

cg2_3.0_scaffold_2103_c_21
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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17985..18626
DNA (642bp) protein (214aa)
Type II DNA modification methyltransferase, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LUX3_RUEPO rbh
type II DNA modification methyltransferase, putative
Type II DNA modification methyltransferase, putative {ECO:0000313|EMBL:AAV94234.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;"
cg2_3.0_scaffold_2103_c_22
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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18630..19346
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LUX4_RUEPO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAV94233.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
cg2_3.0_scaffold_2103_c_23
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19350..21341)
DNA (1992bp) protein (664aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EAQ05105.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EAQ05105.1};; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
aspS; aspartyl-tRNA ligase AspS (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TTX8_9RHOB rbh
cg2_3.0_scaffold_2103_c_24
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21593..22861
DNA (1269bp) protein (423aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VF08_9RHOB rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EAQ12923.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" s
cg2_3.0_scaffold_2103_c_25
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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22925..26257
DNA (3333bp) protein (1111aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria;
carbamoyl phosphate synthase large subunit n=1 Tax=Loktanella hongkongensis RepID=UPI00036B58BC rbh
carB; carbamoyl-phosphate synthase large subunit
cg2_3.0_scaffold_2103_c_26
Leisingera sp. ANG-M7, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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26313..26645
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Phaeobacter gallaeciensis RepID=UPI00030C8FBF rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC37949.1}; TaxID=1577902 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG
fibronectin-binding protein
Displaying 26 items

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