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cg2_3.0_scaffold_5745_c

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_5745_c_1
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(112..1176)
DNA (1065bp) protein (355aa)
Bacterial extracellular solute-binding protein, family 7 n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWC8_9RHOB rbh
Bacterial extracellular solute-binding protein, family 7 {ECO:0000313|EMBL:EEE45110.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzi
Trap-type mannitol/chloroaromatic compound transporter periplasmic component
cg2_3.0_scaffold_5745_c_2
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1206..2768)
DNA (1563bp) protein (521aa)
C4-dicarboxylate ABC transporter permease n=2 Tax=Labrenzia RepID=U7FIM2_9RHOB rbh
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:ERP85840.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="L
TRAP-type mannitol/chloroaromatic compound transport system, large permease
cg2_3.0_scaffold_5745_c_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2758..3240)
DNA (483bp) protein (161aa)
TRAP transporter, DctQ-like membrane protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QWD0_9RHOB rbh
TRAP transporter, DctQ-like membrane protein {ECO:0000313|EMBL:EEE45817.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source=
TRAP transporter, DctQ-like membrane protein,putative
cg2_3.0_scaffold_5745_c_4
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3330..3572)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K9K3_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA06147.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E
hypothetical protein
cg2_3.0_scaffold_5745_c_5
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3565..5814)
DNA (2250bp) protein (750aa)
xanthine dehydrogenase, molybdenum binding protein subunit apoprotein (EC:1.17.1.4)
Xanthine dehydrogenase family protein, large subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K9K2_9RHOB rbh
Xanthine dehydrogenase family protein, large subunit {ECO:0000313|EMBL:KHQ54754.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus
cg2_3.0_scaffold_5745_c_6

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comp(5814..6296)
DNA (483bp) protein (161aa)
Xanthine dehydrogenase family protein, small subunit n=1 Tax=uncultured bacterium RepID=K2AUU5_9BACT rbh
Xanthine dehydrogenase family protein, small subunit {ECO:0000313|EMBL:EKD60153.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
iron-sulfur cluster binding domain-containing protein
cg2_3.0_scaffold_5745_c_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6293..7159)
DNA (867bp) protein (289aa)
Xanthine dehydrogenase family protein, medium subunit n=1 Tax=Sagittula stellata E-37 RepID=A3K9K0_9RHOB rbh
xanthine dehydrogenase family protein, medium subunit Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
xanthine dehydrogenase family protein, medium subunit
cg2_3.0_scaffold_5745_c_trna_1
unknown

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7296..7366
DNA (71bp)
transferRNA
cg2_3.0_scaffold_5745_c_8
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7430..7651)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D659_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEX15792.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicel
cg2_3.0_scaffold_5745_c_9
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7835..8230)
DNA (396bp) protein (132aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CXS0_9RHOB rbh
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
cg2_3.0_scaffold_5745_c_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8690..10285
DNA (1596bp) protein (532aa)
ABC peptide transporter, periplasmic binding protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBT1_9RHOB rbh
ABC peptide transporter, periplasmic binding protein {ECO:0000313|EMBL:EAQ14414.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibact
peptide ABC transporter substrate-binding protein
cg2_3.0_scaffold_5745_c_11
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10297..11400
DNA (1104bp) protein (368aa)
Putative dipeptide permease component of ABC transporter n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DXP1_9RHOB rbh
Putative dipeptide permease component of ABC transporter {ECO:0000313|EMBL:EDQ06229.1}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibu
binding--dependent transport system inner membrane component family protein
cg2_3.0_scaffold_5745_c_12
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11402..12304
DNA (903bp) protein (301aa)
Probable dipeptide transport system permease protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBS9_9RHOB rbh
Probable dipeptide transport system permease protein {ECO:0000313|EMBL:EAQ14412.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibact
dppC1; Oligopeptide ABC transporter,permease component
cg2_3.0_scaffold_5745_c_13
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12309..13289
DNA (981bp) protein (327aa)
Probable ATP-binding component of ABC transporter n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBS8_9RHOB rbh
Dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAQ69625.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source
peptide ABC transporter substrate-binding protein
cg2_3.0_scaffold_5745_c_14
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13286..14242
DNA (957bp) protein (319aa)
Probable ATP-binding component of ABC dipeptide transporter n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBS7_9RHOB rbh
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:BAQ69626.1}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source=
dppF-1; dipeptide ABC transporter ATP-binding protein DppF 1
cg2_3.0_scaffold_5745_c_15
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14283..15062
DNA (780bp) protein (260aa)
Short-chain alcohol dehydrogenase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JHN0_AGRRK rbh
short-chain alcohol dehydrogenase
Putative oxidoreductase {ECO:0000313|EMBL:GAJ93551.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
cg2_3.0_scaffold_5745_c_16
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15432..17231
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
lepA; GTP-binding protein LepA (EC:3.6.5.-)
Elongation factor 4 n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=LEPA_DINSH rbh
cg2_3.0_scaffold_5745_c_17
Jannaschia sp. CCS1, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17489..17725
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28LR2_JANSC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD56350.1}; TaxID=290400 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia sp. (str
cg2_3.0_scaffold_5745_c_18
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17826..19073
DNA (1248bp) protein (416aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8P1D6_PSEAI rbh
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47880.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Me
hypothetical protein
cg2_3.0_scaffold_5745_c_19
unknown

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comp(19205..19321)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 20 items

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