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cg2_3.0_scaffold_1348_c

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1348_c_1
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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106..1065
DNA (960bp) protein (320aa)
citrate (pro-3S)-lyase (EC:4.1.3.6)
Citrate lyase subunit beta n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HAQ4_9RHOB rbh
Citrate lyase subunit beta {ECO:0000313|EMBL:KFE35975.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13
cg2_3.0_scaffold_1348_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1170..2132
DNA (963bp) protein (321aa)
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VBK4_9RHOB rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=
cg2_3.0_scaffold_1348_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2448..3230
DNA (783bp) protein (261aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
signal peptidase I (EC:3.4.21.89)
Type 1 signal peptidase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB94_9RHOB rbh
cg2_3.0_scaffold_1348_c_4
Rhodobacter sp. SW2, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3227..3910
DNA (684bp) protein (228aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:00
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2I9_9RHOB rbh
cg2_3.0_scaffold_1348_c_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3907..4335
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB91_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ14224.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
cg2_3.0_scaffold_1348_c_6
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4404..4967
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Wenxinia marina RepID=UPI000361566D rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE35036.1}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava sp. 13D2W
shikimate kinase domain-containing protein
cg2_3.0_scaffold_1348_c_7
Rhodobacteraceae bacterium KLH11, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4984..5892
DNA (909bp) protein (303aa)
GTPase Era n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NRZ7_9RHOB rbh
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=467661 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobact
era; GTP-binding protein Era
cg2_3.0_scaffold_1348_c_8
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5889..6221
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB87_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ14220.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
GTP-binding protein Era
cg2_3.0_scaffold_1348_c_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6246..6977
DNA (732bp) protein (244aa)
DNA repair protein RecO n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCD2_9RHOB rbh
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=314271 species="Bacteria; Proteobacteria; Alp
DNA repair protein RecO, putative
cg2_3.0_scaffold_1348_c_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6965..7522)
DNA (558bp) protein (186aa)
Regulatory protein, TetR n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCD1_9RHOB rbh
Regulatory protein, TetR {ECO:0000313|EMBL:EAQ13795.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
TetR family transcriptional regulator
cg2_3.0_scaffold_1348_c_11
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7582..8532)
DNA (951bp) protein (317aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=349102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobac
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WY69_RHOS5 rbh
hypothetical protein
cg2_3.0_scaffold_1348_c_12
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8809..10482)
DNA (1674bp) protein (558aa)
isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Acyl-CoA dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB18_9RHOB rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KGB80974.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22
cg2_3.0_scaffold_1348_c_13
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11510
DNA (774bp) protein (258aa)
Membrane protein, putative n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB19_9RHOB rbh
Membrane protein, putative {ECO:0000313|EMBL:EAQ14168.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibact
membrane protein
cg2_3.0_scaffold_1348_c_14
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11565..13163)
DNA (1599bp) protein (533aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Sagittula stellata E-37 RepID=A3JX61_9RHOB rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
cg2_3.0_scaffold_1348_c_15
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13515..14216
DNA (702bp) protein (234aa)
DNA-binding response regulator ChvI n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VC99_9RHOB rbh
DNA-binding response regulator ChvI {ECO:0000313|EMBL:EAQ14171.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Mar
chvI; two component signal transduction response regulator receiver protein ChvI
cg2_3.0_scaffold_1348_c_16
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14265..15995
DNA (1731bp) protein (577aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Two-component sensor histidine kinase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCA1_9RHOB rbh
sensor histidine kinase ChvG
cg2_3.0_scaffold_1348_c_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15992..16450
DNA (459bp) protein (153aa)
Putative kinase/phosphatase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VC91_9RHOB rbh
Putative kinase/phosphatase {ECO:0000313|EMBL:EAQ14173.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibac
Hpr(Ser) kinase/phosphatase
cg2_3.0_scaffold_1348_c_18
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16443..17387
DNA (945bp) protein (315aa)
UPF0042 nucleotide-binding protein RTM1035_03850 n=1 Tax=Roseovarius sp. TM1035 RepID=A6DX85_9RHOB rbh
Nucleotide-binding protein CG51_08830 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source
glmZ(sRNA)-inactivating NTPase
cg2_3.0_scaffold_1348_c_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17384..17776
DNA (393bp) protein (131aa)
PTS system, IIA component (EC:2.7.1.69)
PTS system, IIA component n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VC90_9RHOB rbh
PTS system, IIA component {ECO:0000313|EMBL:EAQ14175.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacte
cg2_3.0_scaffold_1348_c_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17789..18067
DNA (279bp) protein (93aa)
ptsO; phosphocarrier protein NPr (EC:2.7.11.-)
Phosphocarrier protein HPr n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VC92_9RHOB rbh
Phosphocarrier protein HPr {ECO:0000313|EMBL:EAQ14176.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibact
cg2_3.0_scaffold_1348_c_21
Oceanicola batsensis, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..18926
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TVE9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ04495.1}; TaxID=252305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola batsensi
phosphate acyltransferase-like protein
cg2_3.0_scaffold_1348_c_22
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18967..19842)
DNA (876bp) protein (292aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EDQ05961.1}; EC=1.1.1.157 {ECO:0000313|EMBL:EDQ05961.1};; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Oceanicola sp. S124 RepID=UPI0002559F1B rbh
cg2_3.0_scaffold_1348_c_23
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20012..20839
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VB64_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ14179.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
cg2_3.0_scaffold_1348_c_24
Sulfitobacter sp. NAS-14.1, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20902..21822)
DNA (921bp) protein (307aa)
Electron transfer flavoprotein, alpha subunit n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3T2M0_9RHOB rbh
Electron transfer flavoprotein, alpha subunit {ECO:0000313|EMBL:EAP78741.1}; TaxID=314267 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" so
Electron transfer flavoprotein, alpha subunit
cg2_3.0_scaffold_1348_c_25
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21822..22580)
DNA (759bp) protein (253aa)
Electron transfer flavoprotein, beta subunit n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SHT2_9RHOB rbh
Electron transfer flavoprotein, beta subunit {ECO:0000313|EMBL:EAP76913.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source
etfB; electron transfer flavoprotein, beta subunit
cg2_3.0_scaffold_1348_c_26
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22723..23295)
DNA (573bp) protein (191aa)
Cob(I)alamin adenosyltransferase PduO {ECO:0000313|EMBL:EPX76923.1}; EC=2.5.1.17 {ECO:0000313|EMBL:EPX76923.1};; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
Cob(I)alamin adenosyltransferase PduO n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9QBB1_9RHOB rbh
putative ATP--cobalamin adenosyltransferase
cg2_3.0_scaffold_1348_c_27
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23297..23500)
DNA (204bp) protein (68aa)
Conserved domain protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6Q2_9RHOB rbh
Conserved domain protein {ECO:0000313|EMBL:EET47985.1}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobium.;" source="Thalassobium sp.
hypothetical protein
cg2_3.0_scaffold_1348_c_28
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23588..24421)
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BDS2_9RHOB rbh
short-chain dehydrogenase
Tax=BJP_IG2158_Rhodobacterales_64_37
cg2_3.0_scaffold_1348_c_29
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24418..24921)
DNA (504bp) protein (168aa)
DNA topoisomerase IV subunit A n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFM1_9RHOB rbh
DNA topoisomerase IV subunit A {ECO:0000313|EMBL:EAQ13136.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimi
hypothetical protein
cg2_3.0_scaffold_1348_c_30
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25050..27389
DNA (2340bp) protein (780aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=644107 species="Bac
DNA topoisomerase 4 subunit A n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVK0_9RHOB rbh
DNA topoisomerase IV subunit A
Displaying items 1-30 of 34 in total

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