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cg2_3.0_scaffold_3443_c

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3443_c_1
unknown

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comp(1..72)
DNA (72bp) protein (24aa)

This feature has no annotations

cg2_3.0_scaffold_3443_c_2
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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179..685
DNA (507bp) protein (169aa)
Putative cytoplasmic membrane protein FxsA n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RD93_9RHOB rbh
fxsA; putative cytoplasmic membrane protein FxsA
Putative cytoplasmic membrane protein FxsA {ECO:0000313|EMBL:AGI70152.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" sour
cg2_3.0_scaffold_3443_c_3
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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756..1268
DNA (513bp) protein (171aa)
Protein-export protein SecB n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD54_9RHOB rbh
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum s
preprotein translocase subunit SecB
cg2_3.0_scaffold_3443_c_4
Loktanella hongkongensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1265..1963)
DNA (699bp) protein (233aa)
DNA polymerase III epsilon subunit {ECO:0000313|EMBL:EYD73169.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EYD73169.1};; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhod
dnaQ; DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Loktanella hongkongensis RepID=UPI0003738991 rbh
cg2_3.0_scaffold_3443_c_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1956..2555)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=314271 species="Bacteria; Pr
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD61_9RHOB rbh
cg2_3.0_scaffold_3443_c_6
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2552..3073)
DNA (522bp) protein (174aa)
Shikimate dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9RXB7_9RHOB rbh
aroE; shikimate 5-dehydrogenase
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_3443_c_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3389..3988)
DNA (600bp) protein (200aa)
Maf-like protein RB2654_13504 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD63_9RHOB rbh
Maf-like protein RB2654_13504 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Marit
putative Maf-like protein
cg2_3.0_scaffold_3443_c_8
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4397..4861
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZWA2_9BACT rbh
Membrane protein {ECO:0000313|EMBL:KDB03628.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V1
hypothetical protein
cg2_3.0_scaffold_3443_c_9
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5039..6247
DNA (1209bp) protein (403aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1208324 speci
Transcription termination factor Rho n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD65_9RHOB rbh
rho; transcription termination factor Rho
cg2_3.0_scaffold_3443_c_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..7561
DNA (1284bp) protein (428aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rh
tRNA modification GTPase MnmE n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCC3_9RHOB rbh
trmE; tRNA modification GTPase TrmE
cg2_3.0_scaffold_3443_c_11
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7562..9451
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCC4_9RHOB rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=314271 species="Bacter
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
cg2_3.0_scaffold_3443_c_12
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9448..10071
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD66_9RHOB rbh
gidB; 16S rRNA methyltransferase GidB
cg2_3.0_scaffold_3443_c_13
Actibacterium atlanticum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10064..10858
DNA (795bp) protein (265aa)
Chromosome partitioning protein ParA n=1 Tax=Citreicella sp. 357 RepID=I1AU96_9RHOB rbh
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KCV82531.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Ac
parA; chromosome partitioning protein ParA
cg2_3.0_scaffold_3443_c_14
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10869..11765
DNA (897bp) protein (299aa)
Chromosome partitioning protein parB n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD68_9RHOB rbh
Chromosome partitioning protein parB {ECO:0000313|EMBL:EAQ14099.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Ma
parB; chromosome partitioning protein parB
cg2_3.0_scaffold_3443_c_15
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11766..12887)
DNA (1122bp) protein (374aa)
hemN1; coproporphyrinogen III oxidase (EC:1.3.99.22)
Radical SAM family enzyme protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KBX8_9RHOB rbh
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:KGB83746.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum
cg2_3.0_scaffold_3443_c_16
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12919..13530)
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
Non-canonical purine NTP pyrophosphatase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD70_9RHOB rbh
dITP/XTP pyrophosphatase
cg2_3.0_scaffold_3443_c_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13527..14240)
DNA (714bp) protein (238aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
Ribonuclease PH n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD71_9RHOB rbh
rph; ribonuclease PH
cg2_3.0_scaffold_3443_c_18
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14329..15396
DNA (1068bp) protein (356aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Roseovarius sp. TM1035 RepID=A6E507_9RHOB rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
hrcA; HrcA family transcriptional regulator
cg2_3.0_scaffold_3443_c_19
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15401..15988
DNA (588bp) protein (196aa)
Protein GrpE n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD73_9RHOB rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; R
grpE; heat shock protein GrpE
cg2_3.0_scaffold_3443_c_20
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15993..18167)
DNA (2175bp) protein (725aa)
DNA mismatch repair protein MutS n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD74_9RHOB rbh
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
mutS; DNA mismatch repair protein MutS
cg2_3.0_scaffold_3443_c_21
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18167..18643)
DNA (477bp) protein (159aa)
DNA mismatch repair protein MutS n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD74_9RHOB
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteracea
mutS; DNA mismatch repair protein MutS
cg2_3.0_scaffold_3443_c_22
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18678..19625)
DNA (948bp) protein (316aa)
galE; UDP-glucose 4-epimerase GalE (EC:5.1.3.2)
UDP-galactose 4-epimerase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VD75_9RHOB rbh
UDP-galactose 4-epimerase {ECO:0000313|EMBL:EAQ14106.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacte
Displaying 22 items

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