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cg2_3.0_scaffold_6818_c

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_6818_c_1
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..569)
DNA (567bp) protein (189aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ18636.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;
cg2_3.0_scaffold_6818_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(977..3475)
DNA (2499bp) protein (833aa)
Sarcosine dehydrogenase (EC:1.5.8.3)
Aminomethyl transferase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHS5_9RHOB rbh
Aminomethyl transferase family protein {ECO:0000313|EMBL:EAQ12266.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="
cg2_3.0_scaffold_6818_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3622..4725)
DNA (1104bp) protein (368aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLS5_9RHOB rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="
5-amino-6-(5-phosphoribosylamino)uracil reductase
cg2_3.0_scaffold_6818_c_4
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4722..5192)
DNA (471bp) protein (157aa)
Transcriptional repressor NrdR n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9SH37_9RHOB rbh
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
nrdR; transcriptional regulator NrdR
cg2_3.0_scaffold_6818_c_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

5420..5623
DNA (204bp) protein (68aa)
hypothetical protein; K09165 hypothetical protein id=12556717 bin=CNBR_ACIDO species=Maricaulis sp. JL2009 genus=Maricaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
protein of unknown function DUF1458 Tax=RBG_16_Actinobacteria_67_10_curated
protein of unknown function DUF1458
cg2_3.0_scaffold_6818_c_6
Thioclava dalianensis, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5631..6047)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2J4Z9_9RHOB rbh
Secondary thiamine-phosphate synthase {ECO:0000313|EMBL:KEP71434.1}; TaxID=1185766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioc
hypothetical protein
cg2_3.0_scaffold_6818_c_7
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6102..6353)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLS8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ10763.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
cg2_3.0_scaffold_6818_c_8
unknown

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comp(6469..6711)
DNA (243bp) protein (81aa)

This feature has no annotations

cg2_3.0_scaffold_6818_c_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6716..8716)
DNA (2001bp) protein (667aa)
RNA polymerase sigma factor RpoD n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLT1_9RHOB rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rh
rpoD; RNA polymerase sigma factor RpoD
cg2_3.0_scaffold_6818_c_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8838..9833)
DNA (996bp) protein (332aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=314271 species="Bacteria; Proteobacter
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLT2_9RHOB
cg2_3.0_scaffold_6818_c_11
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9842..10795)
DNA (954bp) protein (318aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1417296 species="Bacteria; Proteobacte
DNA primase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VLT2_9RHOB rbh
putative DNA primase
cg2_3.0_scaffold_6818_c_12
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10958..12247
DNA (1290bp) protein (430aa)
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VKK8_9RHOB rbh
Homoserine dehydrogenase {ECO:0000313|EMBL:EAQ11179.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
cg2_3.0_scaffold_6818_c_13
unknown

Not on your lists

12306..12446
DNA (141bp) protein (47aa)

This feature has no annotations

cg2_3.0_scaffold_6818_c_14
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12538..13518
DNA (981bp) protein (327aa)
fructose 1,6-bisphosphatase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B3E907 rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus s
glpX; fructose 1,6-bisphosphatase II
cg2_3.0_scaffold_6818_c_15
Fictibacillus macauensis, Fictibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13526..13732
DNA (207bp) protein (69aa)
Putative hydrolase n=1 Tax=Bacillus macauensis ZFHKF-1 RepID=I8AFF2_9BACI
Putative hydrolase {ECO:0000313|EMBL:EIT84362.1}; TaxID=1196324 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Fictibacillus.;" source="Bacillus macauensis ZFHKF-1.;"
isochorismatase hydrolase
cg2_3.0_scaffold_6818_c_16
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13711..14076
DNA (366bp) protein (122aa)
Isochorismatase hydrolase n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JWA8_9RHOB rbh
Isochorismatase hydrolase {ECO:0000313|EMBL:EBA02122.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HT
isochorismatase hydrolase
cg2_3.0_scaffold_6818_c_17
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14086..14742
DNA (657bp) protein (219aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VKK3_9RHOB rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EAQ11174.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" s
putative single-stranded-DNA-specific exonuclease
Displaying 17 items

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