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cg2_3.0_scaffold_11557_c

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_11557_c_1
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1809)
DNA (1809bp) protein (603aa)
hypF; hydrogenase maturation protein HypF (EC:2.1.3.-)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Citreicella sp. SE45 RepID=D0D938_9RHOB rbh
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:EEX12626.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source=
cg2_3.0_scaffold_11557_c_2
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2453..2659
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFC8_9RHOB rbh
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
50S ribosomal protein L29
cg2_3.0_scaffold_11557_c_3
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2673..2903
DNA (231bp) protein (77aa)
30S ribosomal protein S17 n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VFC7_9RHOB rbh
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimib
rpsQ; 30S ribosomal protein S17
cg2_3.0_scaffold_11557_c_4
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2967..3335
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Rhodobacteraceae RepID=RL14_DINSH rbh
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
cg2_3.0_scaffold_11557_c_5
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3335..3640
DNA (306bp) protein (102aa)
50S ribosomal protein L24 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=RL24_PARDP rbh
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000255|HAMAP-Rule:MF_01326}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus de
cg2_3.0_scaffold_11557_c_6
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3640..4203
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TU61_9RHOB rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sulf
rplE; 50S ribosomal protein L5
cg2_3.0_scaffold_11557_c_7
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4223..4528
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZL95_ROSLO rbh
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria
rpsN; 30S ribosomal protein S14
cg2_3.0_scaffold_11557_c_8
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4541..4933
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JRB1_9RHOB rbh
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacte
rpsH; 30S ribosomal protein S8
cg2_3.0_scaffold_11557_c_9
Loktanella hongkongensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4946..5479
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Loktanella hongkongensis RepID=UPI0003706B56 rbh
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1122180 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Lokt
LSU ribosomal protein L6p (L9e)
cg2_3.0_scaffold_11557_c_10
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5491..5850
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IYS7_9RHOB rbh
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribact
cg2_3.0_scaffold_11557_c_11
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5953..6540
DNA (588bp) protein (196aa)
30S ribosomal protein S5 n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D6X1_9RHOB rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=633131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thala
rpsE; 30S ribosomal protein S5
cg2_3.0_scaffold_11557_c_12
Thioclava sp. 13D2W-2, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6553..6741
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F326 rbh
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1317124 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thi
rpmD; 50S ribosomal protein L30
Displaying 12 items

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