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cg2_3.0_scaffold_1140_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1140_c_1

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comp(3..233)
DNA (231bp) protein (77aa)
Polysaccharide export protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VEI8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN48761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
polysaccharide biosynthesis/export family protein
cg2_3.0_scaffold_1140_c_2
Rubellimicrobium mesophilum, Rubellimicrobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(391..1182)
DNA (792bp) protein (264aa)
Metallophosphoesterase n=1 Tax=Citreicella sp. SE45 RepID=D0D8T4_9RHOB rbh
Serine/threonine protein phosphatase I {ECO:0000313|EMBL:EYD75434.1}; TaxID=442562 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rubellimicrobium.;" source
metallophosphoesterase
cg2_3.0_scaffold_1140_c_3
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1233..3299)
DNA (2067bp) protein (689aa)
Succinoglycan biosynthesis transport protein exoP n=1 Tax=Roseobacter sp. CCS2 RepID=A4EGG2_9RHOB rbh
Chain-length determining protein {ECO:0000313|EMBL:KGB81744.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulu
lipopolysaccharide biosynthesis family protein
cg2_3.0_scaffold_1140_c_trna_1
unknown

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comp(3458..3531)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_1140_c_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3577..4524)
DNA (948bp) protein (316aa)
Putative transporter, RhaT family, DMT superfamily protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCQ8_9RHOB rbh
Putative transporter, RhaT family, DMT superfamily protein {ECO:0000313|EMBL:EAQ13926.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Mariti
hypothetical protein rbh
cg2_3.0_scaffold_1140_c_5
Nannochloropsis gaditana, Nannochloropsis, Eustigmatales, Eustigmatophyceae, Eukaryota

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comp(4650..5756)
DNA (1107bp) protein (369aa)
3-isopropylmalate dehydrogenase {ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|RuleBase:RU004445};; TaxID=1093141 species="Eukaryota; Stramenopiles; Eustigmatophyceae; Eustigmatales; Monodo
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Nannochloropsis gaditana CCMP526 RepID=K8YV98_9STRA rbh
cg2_3.0_scaffold_1140_c_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5854..6936)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCQ2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ13920.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
hypothetical protein
cg2_3.0_scaffold_1140_c_7
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6936..7775)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IVA4_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE74291.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter bae
hypothetical protein
cg2_3.0_scaffold_1140_c_8
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8050..8655)
DNA (606bp) protein (202aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate is
leuD-1; 3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCP8_9RHOB rbh
cg2_3.0_scaffold_1140_c_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8655..10055)
DNA (1401bp) protein (467aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM i
isopropylmalate isomerase (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCP7_9RHOB rbh
cg2_3.0_scaffold_1140_c_10
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10945..12324
DNA (1380bp) protein (460aa)
Mechanosensitive ion channel family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCP4_9RHOB rbh
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:EAQ13912.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sou
putative mscS family mechanosensitive ion channel
cg2_3.0_scaffold_1140_c_11
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12491..12823
DNA (333bp) protein (111aa)
Ribosomal silencing factor RsfS n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCP3_9RHOB rbh
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovul
Iojap protein
cg2_3.0_scaffold_1140_c_12
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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12823..13293
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FT34_9RHOB rbh
ribosomal RNA large subunit methyltransferase
cg2_3.0_scaffold_1140_c_13
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13491..15011
DNA (1521bp) protein (507aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN9_9RHOB rbh
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosp
phosphoglyceromutase
cg2_3.0_scaffold_1140_c_14
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15008..16147
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN8_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ13906.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
peptidase M23B
cg2_3.0_scaffold_1140_c_15
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16165..17505
DNA (1341bp) protein (447aa)
Carboxyl-terminal protease family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN7_9RHOB rbh
Carboxyl-terminal protease family protein {ECO:0000313|EMBL:EAQ13905.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" sourc
carboxyl-terminal protease
cg2_3.0_scaffold_1140_c_16
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17602..18099
DNA (498bp) protein (166aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN6_9RHOB rbh
RNA pyrophosphohydrolase
cg2_3.0_scaffold_1140_c_17
unknown

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18247..18735
DNA (489bp) protein (163aa)

This feature has no annotations

cg2_3.0_scaffold_1140_c_18
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18809..21688
DNA (2880bp) protein (960aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodo
dnaE1; DNA polymerase III subunit alpha (EC:2.7.7.7) rbh
Error-prone DNA polymerase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VCN4_9RHOB rbh
cg2_3.0_scaffold_1140_c_19
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21717..22637)
DNA (921bp) protein (307aa)
Putative protease n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESB4_9RHOB rbh
Putative protease
Putative protease {ECO:0000313|EMBL:AHM05498.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elong
cg2_3.0_scaffold_1140_c_20
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22642..23625)
DNA (984bp) protein (328aa)
Putative protease n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESB5_9RHOB rbh
Collagenase
Collagenase {ECO:0000313|EMBL:AHM05499.1}; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum D
cg2_3.0_scaffold_1140_c_21
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23619..24161)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESB6_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA17286.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK
Sterol binding protein
cg2_3.0_scaffold_1140_c_22
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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24311..25819
DNA (1509bp) protein (503aa)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:AHM05501.1}; EC=4.1.1.- {ECO:0000313|EMBL:AHM05501.1};; TaxID=1294273 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacter
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4ESB7_9RHOB rbh
cg2_3.0_scaffold_1140_c_23
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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25816..26379
DNA (564bp) protein (188aa)
3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX n=1 Tax=Rhodobacter sp. AKP1 RepID=L1K643_9RHOB rbh
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Tax=BJP_IG2158_Rhodobacterales_69_12
cg2_3.0_scaffold_1140_c_24
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26376..26897)
DNA (522bp) protein (174aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2IM22_9RHOB
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EKE71176.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="
hypothetical alcohol dehydrogenase
Displaying 25 items

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