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cg2_3.0_scaffold_383_c

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_383_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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2..2755
DNA (2754bp) protein (918aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9W8_NITMU rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_383_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3448)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Marinobacter lipolyticus RepID=UPI0003726205 rbh
Crp family transcriptional regulator Tax=CG_Rhodocyc_01
Crp family transcriptional regulator
cg2_3.0_scaffold_383_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3620..4132
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQT0_9BURK rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_383_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4230..5435
DNA (1206bp) protein (402aa)
ABC transporter permease n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002EC32D8 rbh
twin-arginine translocation pathway signal protein Tax=CG_Rhodocyc_01
branched-chain amino acid ABC transporter system, substrate-binding protein
cg2_3.0_scaffold_383_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5618..8152
DNA (2535bp) protein (845aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=CG_Rhodocyc_01
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Thauera aminoaromatica S2 RepID=N6Z1I7_9RHOO rbh
cg2_3.0_scaffold_383_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8160..9242
DNA (1083bp) protein (361aa)
serC; phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52] Tax=CG_Rhodocyc_01
Phosphoserine aminotransferase n=2 Tax=Methylovorus RepID=C6XE04_METSD rbh
MFS transporter
cg2_3.0_scaffold_383_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9259..10446
DNA (1188bp) protein (396aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=CG_Rhodocyc_01
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZA5_LEPCP rbh
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
cg2_3.0_scaffold_383_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10474..11538
DNA (1065bp) protein (355aa)
Chorismate mutase/prephenate dehydratase n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2E4_9RHOO rbh
pheA; chorismate mutase/prephenate dehydratase Tax=CG_Rhodocyc_01
pheA; chorismate mutase/prephenate dehydratase
cg2_3.0_scaffold_383_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11555..12658
DNA (1104bp) protein (368aa)
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_Rhodocyc_01
Histidinol-phosphate aminotransferase n=1 Tax=Thauera sp. 63 RepID=N6XE67_9RHOO rbh
histidinol-phosphate aminotransferase
cg2_3.0_scaffold_383_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12670..13554
DNA (885bp) protein (295aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=CG_Rhodocyc_01
prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Thauera terpenica 58Eu RepID=S9ZGP6_9RHOO rbh
cg2_3.0_scaffold_383_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13551..14858
DNA (1308bp) protein (436aa)
aroA; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.5.1.19); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=CG_Rhodocyc_01
aroA; bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4D3_AZOSB rbh
cg2_3.0_scaffold_383_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14855..15565
DNA (711bp) protein (237aa)
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.5.1.19 2.7.4.14); K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=CG_Rhodocyc_01
bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase (EC:2.5.1.19 2.7.4.14)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KB58_THASP
cg2_3.0_scaffold_383_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15716..17350
DNA (1635bp) protein (545aa)
30S ribosomal protein S1 n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K4D4_AZOSB rbh
rpsA; 30S ribosomal protein S1 Tax=CG_Rhodocyc_01
rpsA; 30S ribosomal protein S1
cg2_3.0_scaffold_383_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17361..17645
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2E0_9RHOO rbh
ifhB; integration host factor, beta subunit Tax=CG_Rhodocyc_01
ifhB; integration host factor, beta subunit
cg2_3.0_scaffold_383_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17707..17967
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Thauera RepID=N6XMQ3_9RHOO rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_383_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17971..19146
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2D8_9RHOO rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_383_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19200..20522
DNA (1323bp) protein (441aa)
udgH; putative UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=CG_Rhodocyc_01
udgH; putative UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Azoarcus toluclasticus RepID=UPI000381C969 rbh
cg2_3.0_scaffold_383_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20519..21460
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00035D27DC rbh
rfaE bifunctional protein Tax=CG_Rhodocyc_01
D-heptose-7-phosphate 1-kinase
cg2_3.0_scaffold_383_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21465..22469
DNA (1005bp) protein (335aa)
ADP-L-glycero-D-manno-heptose-6-epimerase; K03274 ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] Tax=CG_Rhodocyc_01
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHX3_AZOSU rbh
ADP-L-glycero-D-manno-heptose-6-epimerase
cg2_3.0_scaffold_383_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22516..23406
DNA (891bp) protein (297aa)
Cysteine synthase B n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2D6_9RHOO rbh
cysM; cysteine synthase B Tax=CG_Rhodocyc_01
cysM; cysteine synthase B
cg2_3.0_scaffold_383_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..23855
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Thauera RepID=N6XMP8_9RHOO rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_383_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23855..24625
DNA (771bp) protein (257aa)
3''''-5'''' exonuclease n=1 Tax=Azoarcus toluclasticus RepID=UPI0003746CDD rbh
propable PolB; K07501 hypothetical protein Tax=CG_Rhodocyc_01
3'-5' exonuclease
cg2_3.0_scaffold_383_c_trna_1
unknown

Not on your lists

24679..24752
DNA (74bp)
transferRNA
cg2_3.0_scaffold_383_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24859..26778
DNA (1920bp) protein (640aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Rhodocyc_01
Threonine--tRNA ligase n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RRP8_ACCPU rbh
threonyl-tRNA synthetase
cg2_3.0_scaffold_383_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26775..27392
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000364A097 rbh
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=CG_Rhodocyc_01
translation initiation factor IF-3
cg2_3.0_scaffold_383_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27485..27682
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2C3_9RHOO rbh
rpmI; 50S ribosomal protein L35 Tax=CG_Rhodocyc_01
rpmI; 50S ribosomal protein L35
cg2_3.0_scaffold_383_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


27695..28054
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Azoarcus toluclasticus RepID=UPI000373DA6B rbh
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=CG_Rhodocyc_01
rplT; 50S ribosomal protein L20
cg2_3.0_scaffold_383_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28135..29187
DNA (1053bp) protein (351aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Rhodocyc_01
phenylalanyl-tRNA synthetase n=1 Tax=Methyloversatilis universalis RepID=UPI000366ECFA rbh
phenylalanyl-tRNA synthetase subunit alpha
cg2_3.0_scaffold_383_c_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


29190..31562
DNA (2373bp) protein (791aa)
phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=CG_Rhodocyc_01
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QHY2_AZOSU rbh
phenylalanyl-tRNA synthetase subunit beta
cg2_3.0_scaffold_383_c_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31573..31875
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=1 Tax=Azoarcus sp. KH32C RepID=H0Q2B9_9RHOO rbh
ihfA; integration host factor, alpha subunit Tax=CG_Rhodocyc_01
ihfA; integration host factor, alpha subunit
Displaying items 1-30 of 43 in total

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