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cg2_3.0_scaffold_1352_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1352_c_1
unknown

Not on your lists

comp(3..77)
DNA (75bp) protein (25aa)

This feature has no annotations

cg2_3.0_scaffold_1352_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100..522)
DNA (423bp) protein (141aa)
MerD protein n=1 Tax=Acinetobacter calcoaceticus RepID=Q9RHF7_ACICA rbh
merD; transcriptional regulator MerD Tax=CG_Rhodocyc_01
merD; transcriptional regulator MerD
cg2_3.0_scaffold_1352_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(540..2225)
DNA (1686bp) protein (562aa)
merA; mercuric reductase (EC:1.16.1.1); K00520 mercuric reductase [EC:1.16.1.1] Tax=CG_Rhodocyc_01
merA; mercuric reductase (EC:1.16.1.1)
MerA mercuric reductase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82W56_NITEU rbh
cg2_3.0_scaffold_1352_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2222..2473)
DNA (252bp) protein (84aa)
MerF n=31 Tax=root RepID=Q7BRI1_ECOLX rbh
mercury ion transport transmembrane protein merf Tax=CG_Rhodocyc_01
MerF mercury ion transport protein
cg2_3.0_scaffold_1352_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2479..2754)
DNA (276bp) protein (92aa)
Periplasmic mercury(+2) binding protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FSJ1_BURVI rbh
merP; mercury scavenger protein; K08364 periplasmic mercuric ion binding protein Tax=CG_Rhodocyc_01
merP; mercury scavenger protein
cg2_3.0_scaffold_1352_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2767..3117)
DNA (351bp) protein (117aa)
Mercuric transport protein n=10 Tax=Proteobacteria RepID=MERT_ALCSP rbh
Mercuric ion transport protein; K08363 mercuric ion transport protein Tax=CG_Rhodocyc_01
mercuric transport protein
cg2_3.0_scaffold_1352_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3189..3611
DNA (423bp) protein (141aa)
Transcriptional regulator, MerR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9Y6_ALIDK rbh
MerR family transcriptional regulator Tax=CG_Rhodocyc_01
MerR family transcriptional regulator
cg2_3.0_scaffold_1352_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3754..5361)
DNA (1608bp) protein (536aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49); K01610 phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] Tax=CG_Rhodocyc_01
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSB3_ALLVD rbh
cg2_3.0_scaffold_1352_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5493..7118)
DNA (1626bp) protein (542aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9); K01810 glucose-6-phosphate isomerase [EC:5.3.1.9] Tax=CG_Rhodocyc_01
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5N1_AZOSB rbh
cg2_3.0_scaffold_1352_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7115..8743)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIM6_ACCPU rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_1352_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8792..10306)
DNA (1515bp) protein (505aa)
hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily; K01676 fumarate hydratase, class I [EC:4.2.1.2] Tax=CG_Rhodocyc_01
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L592_FRAAD rbh
hydro-lyase, Fe-S type, tartrate/fumarate subfamily,hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily
cg2_3.0_scaffold_1352_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10718..12757
DNA (2040bp) protein (680aa)
h16_A1616; Acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=CG_Rhodocyc_01
h16_A1616; Acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetate--CoA ligase n=1 Tax=Burkholderia sp. BT03 RepID=J3BW51_9BURK rbh
cg2_3.0_scaffold_1352_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12875..13081
DNA (207bp) protein (69aa)
acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=CG_Rhodocyc_01
acetyl-CoA synthetase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036364DF
acetate--CoA ligase
cg2_3.0_scaffold_1352_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13167..13376
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K2_POLSJ rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_1352_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13392..16145
DNA (2754bp) protein (918aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124K1_POLSJ rbh
periplasmic sensor signal transduction histidine kinase Tax=CG_Rhodocyc_01
sensor signal transduction histidine kinase
cg2_3.0_scaffold_1352_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16162..16539
DNA (378bp) protein (126aa)
Response regulator receiver protein n=2 Tax=Thauera RepID=C4KA25_THASP rbh
response regulator receiver protein Tax=CG_Rhodocyc_01
response regulator receiver protein
cg2_3.0_scaffold_1352_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16568..18739
DNA (2172bp) protein (724aa)
exonuclease n=1 Tax=Azoarcus toluclasticus RepID=UPI000373A0E2 rbh
dnaQ; DNA polymerase III, epsilon subunit Tax=CG_Rhodocyc_01
dnaQ; DNA polymerase III, epsilon subunit
cg2_3.0_scaffold_1352_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18759..20216
DNA (1458bp) protein (486aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124J8_POLSJ rbh
signal-transduction protein; K07182 CBS domain-containing protein Tax=CG_Rhodocyc_01
signal-transduction protein
cg2_3.0_scaffold_1352_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20235..20912)
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X6A4_THIK1 rbh
qseB; Transcriptional regulatory protein qseB Tax=CG_Rhodocyc_01
qseB; Transcriptional regulatory protein qseB
cg2_3.0_scaffold_1352_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21154..21417
DNA (264bp) protein (88aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D9526 rbh
putative solute:sodium symporter small subunit Tax=CG_Rhodocyc_01
Putative solute:sodium symporter, small subunit
cg2_3.0_scaffold_1352_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21421..23499
DNA (2079bp) protein (693aa)
Na+/solute symporter n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AHH4_9PROT rbh
Na+/solute symporter; K14393 cation/acetate symporter Tax=CG_Rhodocyc_01
Uncharacterized symporter H16_A2524
cg2_3.0_scaffold_1352_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23582..24163)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000367427F rbh
Tfp pilus assembly protein PilF-like protein Tax=CG_Rhodocyc_01
tetratricopeptide repeat protein
cg2_3.0_scaffold_1352_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24272..24610
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003776E77 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_1352_c_trna_1
unknown

Not on your lists

24686..24773
DNA (88bp)
transferRNA
cg2_3.0_scaffold_1352_c_24
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24805..25032)
DNA (228bp) protein (76aa)
transposase IS200 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B326DF
transposase IS200-family protein; K07491 putative transposase Tax=RBG_16_Gammaproteobacteria_57_12_curated
hypothetical protein
Displaying 25 items

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