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cg2_3.0_scaffold_292_c

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_292_c_1
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AV49_9RHOO
tnp24; transposase; K07491 putative transposase Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
tnp24; transposase
cg2_3.0_scaffold_292_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242..562)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AV49_9RHOO rbh
tnp24; transposase; K07491 putative transposase Tax=CG_Rhodocyc_01
tnp24; transposase
cg2_3.0_scaffold_292_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

655..1689
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIV6_THIDA rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_292_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1704..2693)
DNA (990bp) protein (330aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=CG_Rhodocyc_01
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037DF960 rbh
cg2_3.0_scaffold_292_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2690..2884)
DNA (195bp) protein (65aa)
Tax=CG_Rhodocyc_01
cg2_3.0_scaffold_292_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2924..3283)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHB1_NITSI rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_292_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4025..5119)
DNA (1095bp) protein (365aa)
6-phosphofructokinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8E9_9PROT rbh
phosphofructokinase Tax=CG_Rhodocyc_01
phosphofructokinase
cg2_3.0_scaffold_292_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5253..5354
DNA (102bp) protein (34aa)
Tax=CG_Rhodocyc_01
cg2_3.0_scaffold_292_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..6021)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037EC61B rbh
multiple antibiotic resistance (MarC)-like proteins; K05595 multiple antibiotic resistance protein Tax=CG_Rhodocyc_01
multiple antibiotic resistance (MarC)-like proteins
cg2_3.0_scaffold_292_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6178..7065)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DH41_SINAD rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_292_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7165..10296)
DNA (3132bp) protein (1044aa)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DIU2_SINAD rbh
DNA/RNA helicase Tax=CG_Rhodocyc_01
DNA/RNA helicase
cg2_3.0_scaffold_292_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10692..11153
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYG9_THIND
protein of unknown function DUF820 Tax=CG_Rhodocyc_01
protein of unknown function DUF820
cg2_3.0_scaffold_292_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11173..11640)
DNA (468bp) protein (156aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8] Tax=CG_Rhodocyc_01
Thioredoxin n=1 Tax=Thauera aminoaromatica S2 RepID=N6YRD0_9RHOO rbh
thioredoxin
cg2_3.0_scaffold_292_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11689..12627)
DNA (939bp) protein (313aa)
membrane protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003758193 rbh
auxin efflux carrier; K07088 Tax=CG_Rhodocyc_01
membrane protein
cg2_3.0_scaffold_292_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12808..14139)
DNA (1332bp) protein (444aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APP9_9PROT rbh
arxR; two component, sigma54 specific, transcriptional regulator, Fis family Tax=CG_Rhodocyc_01
arxR; two component, sigma54 specific, transcriptional regulator, Fis family
cg2_3.0_scaffold_292_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14109..15581)
DNA (1473bp) protein (491aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE47_9PROT rbh
arxS; integral membrane sensor signal transduction histidine kinase Tax=CG_Rhodocyc_01
arxS; integral membrane sensor signal transduction histidine kinase
cg2_3.0_scaffold_292_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15578..16564)
DNA (987bp) protein (329aa)
Phosphonate-binding periplasmic protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B9C2_9PROT rbh
arxX; phosphonate-binding periplasmic protein Tax=CG_Rhodocyc_01
phosphonate-binding periplasmic protein
cg2_3.0_scaffold_292_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16655..17824
DNA (1170bp) protein (390aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AKI6_9PROT rbh
arxB2; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Tax=CG_Rhodocyc_01
arxB2; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
cg2_3.0_scaffold_292_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17836..20373
DNA (2538bp) protein (846aa)
phsA_[H]; Formate dehydrogenase O alpha subunit (EC:1.2.1.2) Tax=CG_Rhodocyc_01
phsA_[H]; Formate dehydrogenase O alpha subunit (EC:1.2.1.2)
molybdopterin oxidoreductase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003657D88 rbh
cg2_3.0_scaffold_292_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20384..21133
DNA (750bp) protein (250aa)
arxB; Fe-S-cluster-containing hydrogenase components 1 Tax=CG_Rhodocyc_01
arxB; Fe-S-cluster-containing hydrogenase components 1 id=12553700 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
arxB; Fe-S-cluster-containing hydrogenase components 1
cg2_3.0_scaffold_292_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21147..22433
DNA (1287bp) protein (429aa)
arxC; polysulfide reductase, NrfD Tax=CG_Rhodocyc_01
arxC; polysulfide reductase, NrfD id=12553701 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
arxC; polysulfide reductase, NrfD
cg2_3.0_scaffold_292_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22490..23287
DNA (798bp) protein (266aa)
arxD; hypothetical protein Tax=CG_Rhodocyc_01
arxD; hypothetical protein id=12553702 bin=BDI species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
arxD; hypothetical protein
cg2_3.0_scaffold_292_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23393..24631)
DNA (1239bp) protein (413aa)
serine dehydratase alpha chain; K01752 L-serine dehydratase [EC:4.3.1.17] Tax=CG_Rhodocyc_01
Serine dehydratase alpha chain n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RJ27_ACCPU rbh
serine dehydratase alpha chain
cg2_3.0_scaffold_292_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24628..26088)
DNA (1461bp) protein (487aa)
cysteine synthase Tax=CG_Rhodocyc_01
cysteine synthase
cg2_3.0_scaffold_292_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26108..27280)
DNA (1173bp) protein (391aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=CG_Rhodocyc_01
thrC; threonine synthase (EC:4.2.3.1)
cg2_3.0_scaffold_292_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27299..28237)
DNA (939bp) protein (313aa)
dcaS2; N-carbamoyl-D-amino-acid hydrolase (EC:3.5.1.77) Tax=CG_Rhodocyc_01
N-carbamyl-D-amino acid amidohydrolase n=1 Tax=Thauera sp. 28 RepID=N6YKU2_9RHOO rbh
N-carbamoyl-D-amino acid hydrolase
cg2_3.0_scaffold_292_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28278..29528)
DNA (1251bp) protein (417aa)
amaB; N-carbamoyl-L-amino acid hydrolase AmaB (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=CG_Rhodocyc_01
Allantoate amidohydrolase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X7P9_9BURK rbh
allantoate amidohydrolase
cg2_3.0_scaffold_292_c_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29525..30562)
DNA (1038bp) protein (346aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7ULU4_9DELT rbh
TRAP dicarboxylate transporter subunit DctP Tax=CG_Rhodocyc_01
TRAP dicarboxylate transporter subunit DctP
cg2_3.0_scaffold_292_c_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30645..31925)
DNA (1281bp) protein (427aa)
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Thauera sp. 28 RepID=N6ZJ08_9RHOO rbh
TRAP dicarboxylate transporter subunit DctM Tax=CG_Rhodocyc_01
TRAP dicarboxylate transporter subunit DctM
cg2_3.0_scaffold_292_c_30
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31925..32467)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037691C9 rbh
tripartite AtP-independent periplasmic transporter subunit DctQ Tax=CG_Rhodocyc_01
TRAP-type C4-dicarboxylate transport system, small permease component
Displaying items 1-30 of 80 in total

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