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cg2_3.0_scaffold_445_c

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_445_c_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23..1114)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479L9_DECAR rbh
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=CG_Rhodocyc_01
ychF; GTP-dependent nucleic acid-binding protein EngD
cg2_3.0_scaffold_445_c_2
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1158..1769)
DNA (612bp) protein (204aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=CG_Rhodocyc_01
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Azoarcus sp. (strain BH72) RepID=PTH_AZOSB rbh
cg2_3.0_scaffold_445_c_3
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1848..2555)
DNA (708bp) protein (236aa)
50S ribosomal protein L25 n=1 Tax=Thiobacillus thioparus RepID=UPI0003723DA9 rbh
50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 Tax=CG_Rhodocyc_01
50S ribosomal protein L25/general stress protein Ctc
cg2_3.0_scaffold_445_c_4
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2652..3602)
DNA (951bp) protein (317aa)
phosphoribosyl transferase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=CG_Rhodocyc_01
ribose-phosphate pyrophosphokinase n=1 Tax=Methyloversatilis universalis RepID=UPI000363944C rbh
ribose-phosphate pyrophosphokinase
cg2_3.0_scaffold_445_c_trna_1
unknown

Not on your lists

comp(3701..3775)
DNA (75bp)
transferRNA
cg2_3.0_scaffold_445_c_5
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3789..4634)
DNA (846bp) protein (282aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=CG_Rhodocyc_01
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJL2_AZOSU rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
cg2_3.0_scaffold_445_c_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4872..5438)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037E2F0A rbh
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB Tax=CG_Rhodocyc_01
outer membrane lipoprotein LolB
cg2_3.0_scaffold_445_c_7
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5438..7150)
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035F5EC6 rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_445_c_8
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7294..8106
DNA (813bp) protein (271aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=CG_Rhodocyc_01
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thauera sp. 63 RepID=N6X991_9RHOO rbh
cg2_3.0_scaffold_445_c_9
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8177..10120
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Z3Z1_9RHOO rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_445_c_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10124..10381)
DNA (258bp) protein (86aa)
ferredoxin n=1 Tax=Azoarcus toluclasticus RepID=UPI00036580FD rbh
fdx; ferredoxin protein Tax=CG_Rhodocyc_01
fdx; ferredoxin protein
cg2_3.0_scaffold_445_c_11
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..10887)
DNA (504bp) protein (168aa)
pantetheine-phosphate adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=CG_Rhodocyc_01
phosphopantetheine adenylyltransferase n=1 Tax=Methyloversatilis universalis RepID=UPI00036AE4A4 rbh
phosphopantetheine adenylyltransferase
cg2_3.0_scaffold_445_c_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10884..11465)
DNA (582bp) protein (194aa)
N-6 adenine-specific DNA methylase (EC:2.1.1.-); K00599 [EC:2.1.1.-] Tax=CG_Rhodocyc_01
N-6 adenine-specific DNA methylase (EC:2.1.1.-)
Probable N6-adenine-specific methylase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P731_AROAE rbh
cg2_3.0_scaffold_445_c_13
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11479..12789)
DNA (1311bp) protein (437aa)
Zn dependent peptidase; K01422 [EC:3.4.99.-] Tax=CG_Rhodocyc_01
zinc protease n=1 Tax=Methyloversatilis universalis RepID=UPI000362C9A9 rbh
peptidase M16, C-terminal:peptidase M16, N-terminal, partial
cg2_3.0_scaffold_445_c_14
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12786..14168)
DNA (1383bp) protein (461aa)
peptidase M16 n=1 Tax=Methyloversatilis universalis RepID=UPI00036BD2D9 rbh
putative Zn-dependent peptidase Tax=CG_Rhodocyc_01
putative peptidase M16
cg2_3.0_scaffold_445_c_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14288..15253
DNA (966bp) protein (322aa)
Signal recognition particle receptor FtsY n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RHK0_9RHOO rbh
FtsY; signal recognition particle-docing protein FtsY; K03110 fused signal recognition particle receptor Tax=CG_Rhodocyc_01
signal recognition particle-docking protein FtsY
cg2_3.0_scaffold_445_c_16
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15291..15944
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI000382A724 rbh
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=CG_Rhodocyc_01
cell division ATP-binding protein FtsE
cg2_3.0_scaffold_445_c_17
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15941..16840
DNA (900bp) protein (300aa)
Cell division protein FtsX n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479N6_DECAR rbh
cell division protein FtsX; K09811 cell division transport system permease protein Tax=CG_Rhodocyc_01
cell division protein FtsX
cg2_3.0_scaffold_445_c_18
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16848..17234)
DNA (387bp) protein (129aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107] Tax=CG_Rhodocyc_01
Diacylglycerol kinase n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SDW2_GALCS rbh
diacylglycerol kinase
cg2_3.0_scaffold_445_c_19
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17416..18312
DNA (897bp) protein (299aa)
ABC transporter substrate-binding protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031828E3 rbh
gltI; glutamate/aspartate periplasmic binding protein ABC transporter; K10001 glutamate/aspartate transport system substrate-binding protein Tax=CG_Rhodocyc_01
gltI; glutamate/aspartate periplasmic binding protein ABC transporter
cg2_3.0_scaffold_445_c_20
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18371..19108
DNA (738bp) protein (246aa)
glutamate ABC transporter permease n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002DDB39E rbh
gltJ; glutamate/aspartate ABC type transport system permease; K10003 glutamate/aspartate transport system permease protein Tax=CG_Rhodocyc_01
gltJ; glutamate/aspartate ABC type transport system permease
cg2_3.0_scaffold_445_c_21
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19331..19426
DNA (96bp) protein (32aa)
ABC transporter (EC:3.6.3.27); K10004 glutamate/aspartate transport system ATP-binding protein [EC:3.6.3.-] Tax=CG_Rhodocyc_01
cg2_3.0_scaffold_445_c_22
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19456..24252)
DNA (4797bp) protein (1599aa)
NAD-glutamate dehydrogenase; K15371 glutamate dehydrogenase [EC:1.4.1.2] Tax=CG_Rhodocyc_01
NAD-glutamate dehydrogenase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJN3_THASP rbh
NAD-glutamate dehydrogenase
cg2_3.0_scaffold_445_c_23
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24327..25214)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YSL6_9RHOO rbh
hypothetical protein Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_445_c_24
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25274..27328
DNA (2055bp) protein (685aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSP7_SIDLE rbh
hypothetical protein; K06888 Tax=CG_Rhodocyc_01
hypothetical protein
cg2_3.0_scaffold_445_c_25
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27356..27676
DNA (321bp) protein (107aa)
Cytochrome C class I n=1 Tax=Thauera sp. 63 RepID=N6Y555_9RHOO rbh
cytochrome c, class I Tax=CG_Rhodocyc_01
cytochrome c, class I
cg2_3.0_scaffold_445_c_26
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27787..29055
DNA (1269bp) protein (423aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGG1_AZOSU rbh
branched-chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CG_Rhodocyc_01
branched-chain amino acid ABC transporter periplasmic protein
cg2_3.0_scaffold_445_c_27
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29223..30146
DNA (924bp) protein (308aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGG0_AZOSU rbh
branched-chain amino acid ABC-type transport system, permease component; K01997 branched-chain amino acid transport system permease protein Tax=CG_Rhodocyc_01
branched-chain amino acid ABC-type transport system, permease component
cg2_3.0_scaffold_445_c_28
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30143..31243
DNA (1101bp) protein (367aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QGF9_AZOSU rbh
branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein Tax=CG_Rhodocyc_01
branched-chain amino acid ABC transporter permease
cg2_3.0_scaffold_445_c_29
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31243..32010
DNA (768bp) protein (256aa)
ABC transporter related n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RK25_ACCPU rbh
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=CG_Rhodocyc_01
branched-chain amino acid ABC transporter ATPase
Displaying items 1-30 of 76 in total

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