ggKbase home page

cg2_3.0_scaffold_1000_c

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1000_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1298
DNA (1296bp) protein (432aa)
aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] Tax=CG_Rhodof_02
coniferyl aldehyde dehydrogenase n=1 Tax=Janthinobacterium lividum RepID=UPI000288167D
aldehyde dehydrogenase
cg2_3.0_scaffold_1000_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1366..3669)
DNA (2304bp) protein (768aa)
malic enzyme (EC:1.1.1.39); K00029 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] Tax=CG_Rhodof_02
malic enzyme (EC:1.1.1.39)
Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKZ9_POLNA rbh
cg2_3.0_scaffold_1000_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3787..4320)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YHD0_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4473..5534)
DNA (1062bp) protein (354aa)
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=CG_Rhodof_02
CDP-6-deoxy-delta-3,4-glucoseen reductase n=1 Tax=Variovorax paradoxus RepID=UPI00036BDB14 rbh
oxidoreductase fad/NAD(P)-binding domain-containing protein
cg2_3.0_scaffold_1000_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5582..6523
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125V4_POLSJ rbh
NAD-dependent epimerase/dehydratase Tax=CG_Rhodof_02
NAD-dependent epimerase/dehydratase
cg2_3.0_scaffold_1000_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6585..7631)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YC55_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7889..8401)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVP9_ACCPU
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8406..8702)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVQ0_ACCPU rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9002..9568)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0K2G9_STEMA rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9714..10718)
DNA (1005bp) protein (335aa)
Bile acid:sodium symporter n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GE95_SPITZ
bile acid:sodium symporter Tax=CG_Rhodof_02
bile acid:sodium symporter
cg2_3.0_scaffold_1000_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10751..11116)
DNA (366bp) protein (122aa)
Carboxymuconolactone decarboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXW5_9BURK rbh
Carboxymuconolactone decarboxylase Tax=CG_Rhodof_02
Carboxymuconolactone decarboxylase
cg2_3.0_scaffold_1000_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11295..14387)
DNA (3093bp) protein (1031aa)
RND efflux system multidrug efflux transporter n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE32_9PROT rbh
RND efflux system multidrug efflux transporter Tax=CG_Rhodof_02
RND efflux system multidrug efflux transporter
cg2_3.0_scaffold_1000_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14390..15556)
DNA (1167bp) protein (389aa)
RND efflux system membrane fusion protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6APM8_9PROT rbh
RND efflux system membrane fusion protein Tax=CG_Rhodof_02
RND efflux system membrane fusion protein
cg2_3.0_scaffold_1000_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15562..16851)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ABN3_9PROT rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16872..16961)
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AMD8_9PROT
hypothetical protein
Tax=CG_Rhodof_02
cg2_3.0_scaffold_1000_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17370..17654)
DNA (285bp) protein (95aa)
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17651..17971)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AAJ3_9PROT rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18038..18274)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. Chol1 RepID=K5YIW9_9PSED rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18283..19467)
DNA (1185bp) protein (395aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=CG_Rhodof_02
Acetyl-CoA acetyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTG3_ALIDB rbh
acetyl-CoA acetyltransferase
cg2_3.0_scaffold_1000_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19489..20574)
DNA (1086bp) protein (362aa)
oxidoreductase fad-binding domain protein; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1] Tax=CG_Rhodof_02
Oxidoreductase FAD-binding domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTG2_ALIDB rbh
oxidoreductase FAD-binding domain-containing protein
cg2_3.0_scaffold_1000_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20608..20790)
DNA (183bp) protein (61aa)
OsmC-like protein n=1 Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9ABC4_9LEPT rbh
osmC-like protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1000_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21004..21351)
DNA (348bp) protein (116aa)
putative transferase/hydrolase Tax=CG_Rhodof_02
sulfurtransferase
cg2_3.0_scaffold_1000_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21526..21639
DNA (114bp) protein (38aa)
Carboxymuconolactone decarboxylase Tax=CG_Rhodof_02
cg2_3.0_scaffold_1000_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21680..22564)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXW6_9BURK rbh
thiol:disulfide interchange protein Tax=CG_Rhodof_02
dsbD; thiol:disulfide interchange protein
cg2_3.0_scaffold_1000_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22711..23781)
DNA (1071bp) protein (357aa)
Bile acid:sodium symporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S90_RHOFD rbh
bile acid:sodium symporter; K03325 arsenite transporter, ACR3 family Tax=CG_Rhodof_02
bile acid:sodium symporter
cg2_3.0_scaffold_1000_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23778..24284)
DNA (507bp) protein (169aa)
Protein tyrosine phosphatase n=1 Tax=uncultured bacterium RepID=K2EDZ5_9BACT rbh
protein tyrosine phosphatase Tax=CG_Rhodof_02
protein tyrosine phosphatase
cg2_3.0_scaffold_1000_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24277..26151)
DNA (1875bp) protein (625aa)
arsenite-activated ATPase (arsA) (EC:3.6.3.16); K01551 arsenite-transporting ATPase [EC:3.6.3.16] Tax=CG_Rhodof_02
arsenite-activated ATPase (arsA) (EC:3.6.3.16)
Arsenite-activated ATPase (ArsA) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S89_RHOFD rbh
cg2_3.0_scaffold_1000_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26148..26522)
DNA (375bp) protein (125aa)
Arsenical resistance operon trans-acting repressor ArsD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S88_RHOFD rbh
arsenical resistance operon trans-acting repressor ArsD Tax=CG_Rhodof_02
arsenical resistance operon trans-acting repressor ArsD
cg2_3.0_scaffold_1000_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26552..26881)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S86_RHOFD rbh
ArsR family transcriptional regulator Tax=CG_Rhodof_02
ArsR family transcriptional regulator
cg2_3.0_scaffold_1000_c_30
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26986..27579)
DNA (594bp) protein (198aa)
glutathione peroxydase (EC:1.11.1.9); K00432 glutathione peroxidase [EC:1.11.1.9] Tax=CG_Rhodof_02
glutathione peroxidase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00037D7D1B rbh
glutathione peroxidase family protein
Displaying items 1-30 of 31 in total

View Taxonomy