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cg2_3.0_scaffold_1714_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1714_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1114
DNA (1113bp) protein (371aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FT4_DECAR rbh
aromatic hydrocarbon degradation protein; K06076 long-chain fatty acid transport protein Tax=CG_Rhodof_02
aromatic hydrocarbon degradation protein
cg2_3.0_scaffold_1714_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1115..2197)
DNA (1083bp) protein (361aa)
Translation factor SUA5 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222V0_RHOFD rbh
Sua5/YciO/YrdC/YwlC; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=CG_Rhodof_02
Sua5/YciO/YrdC/YwlC
cg2_3.0_scaffold_1714_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2256..3461)
DNA (1206bp) protein (402aa)
phosphoribosylaminoimidazole carboxylase ATPase (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] Tax=CG_Rhodof_02
phosphoribosylaminoimidazole carboxylase ATPase (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222U9_RHOFD rbh
cg2_3.0_scaffold_1714_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3458..3952)
DNA (495bp) protein (165aa)
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21); K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=CG_Rhodof_02
phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222U8_RHOFD rbh
cg2_3.0_scaffold_1714_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3990..4946
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000374230F rbh
thioredoxin; K05838 putative thioredoxin Tax=CG_Rhodof_02
thioredoxin
cg2_3.0_scaffold_1714_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4975..5556)
DNA (582bp) protein (194aa)
PfpI family intracellular peptidase; K05520 protease I [EC:3.2.-.-] Tax=CG_Rhodof_02
Intracellular protease, PfpI family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VU34_POLNA rbh
PfpI family intracellular peptidase
cg2_3.0_scaffold_1714_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5636..6553)
DNA (918bp) protein (306aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=CG_Rhodof_02
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PUR7_RHOFD rbh
cg2_3.0_scaffold_1714_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6871..7146
DNA (276bp) protein (92aa)
hypothetical protein; K09803 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1714_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7139..7381
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE60_9DELT rbh
hypothetical protein Tax=CG_Rhodof_02
cg2_3.0_scaffold_1714_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7566..8630)
DNA (1065bp) protein (355aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=CG_Rhodof_02
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222U1_RHOFD rbh
cg2_3.0_scaffold_1714_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8722..10152)
DNA (1431bp) protein (477aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40] Tax=CG_Rhodof_02
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222U0_RHOFD rbh
cg2_3.0_scaffold_1714_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..10591)
DNA (363bp) protein (121aa)
Branched-chain amino acid transport n=1 Tax=uncultured bacterium RepID=K2CX16_9BACT rbh
branched-chain amino acid transport Tax=CG_Rhodof_02
branched-chain amino acid transport
cg2_3.0_scaffold_1714_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..11343)
DNA (756bp) protein (252aa)
AzlC family protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VU44_POLNA rbh
AzlC family protein Tax=CG_Rhodof_02
AzlC family protein
cg2_3.0_scaffold_1714_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11343..12341)
DNA (999bp) protein (333aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=CG_Rhodof_02
Methionyl-tRNA formyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=FMT_RHOFD rbh
methionyl-tRNA formyltransferase
cg2_3.0_scaffold_1714_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12338..12847)
DNA (510bp) protein (170aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=CG_Rhodof_02
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RP4_RHOFD rbh
cg2_3.0_scaffold_1714_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12978..14180
DNA (1203bp) protein (401aa)
Peptidoglycan-binding LysM n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RP3_RHOFD rbh
peptidoglycan-binding LysM Tax=CG_Rhodof_02
peptidoglycan-binding LysM
cg2_3.0_scaffold_1714_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14198..15364
DNA (1167bp) protein (389aa)
DNA processing protein DprA, putative n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RP2_RHOFD rbh
DNA processing protein DprA; K04096 DNA processing protein Tax=CG_Rhodof_02
DNA processing protein DprA
cg2_3.0_scaffold_1714_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15369..17708)
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NCP9_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1714_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17730..18686)
DNA (957bp) protein (319aa)
Protein-export membrane protein SecF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21RN9_RHOFD rbh
secF; preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF Tax=CG_Rhodof_02
secF; preprotein translocase subunit SecF
cg2_3.0_scaffold_1714_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18700..20583)
DNA (1884bp) protein (628aa)
Protein translocase subunit SecD n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD64_9BURK rbh
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD Tax=CG_Rhodof_02
secD; preprotein translocase subunit SecD
cg2_3.0_scaffold_1714_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20640..20972)
DNA (333bp) protein (111aa)
preprotein translocase subunit YajC n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002FDA08B rbh
hypothetical protein; K03210 preprotein translocase subunit YajC Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1714_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21109..24669)
DNA (3561bp) protein (1187aa)
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8); K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=CG_Rhodof_02
indolepyruvate ferredoxin oxidoreductase (EC:1.2.7.8)
Pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122L2_POLSJ rbh
cg2_3.0_scaffold_1714_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24904..26061)
DNA (1158bp) protein (386aa)
MltA domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IAG5_9BURK rbh
MltA domain-containing protein Tax=CG_Rhodof_02
MltA domain-containing protein
cg2_3.0_scaffold_1714_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26061..26900)
DNA (840bp) protein (280aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K01501 nitrilase [EC:3.5.5.1] Tax=CG_Rhodof_02
apolipoprotein acyltransferase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003959D9F rbh
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
cg2_3.0_scaffold_1714_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26897..28543)
DNA (1647bp) protein (549aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222D3_RHOFD
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
Displaying 25 items

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