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cg2_3.0_scaffold_1642_c

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1642_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1367
DNA (1365bp) protein (455aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=CG_Rhodof_02
ATP-dependent DNA helicase RecG n=1 Tax=Polaromonas sp. CF318 RepID=J3D363_9BURK rbh
ATP-dependent DNA helicase RecG
cg2_3.0_scaffold_1642_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1378..1800)
DNA (423bp) protein (141aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221B5_RHOFD rbh
signal-transduction protein Tax=CG_Rhodof_02
signal-transduction protein
cg2_3.0_scaffold_1642_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1837..2202
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S71_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1642_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2227..3192
DNA (966bp) protein (322aa)
Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S72_RHOFD rbh
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator Tax=CG_Rhodof_02
LysR family transcriptional regulator
cg2_3.0_scaffold_1642_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3218..4081
DNA (864bp) protein (288aa)
4-hydroxybenzoate polyprenyl transferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=CG_Rhodof_02
4-hydroxybenzoate octaprenyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=UBIA_RHOFD rbh
4-hydroxybenzoate polyprenyl transferase
cg2_3.0_scaffold_1642_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4106..4921)
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=CG_Rhodof_02
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S74_RHOFD rbh
cg2_3.0_scaffold_1642_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5002..6504)
DNA (1503bp) protein (501aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] Tax=CG_Rhodof_02
Glycerol kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=GLPK_RHOFD rbh
glycerol kinase
cg2_3.0_scaffold_1642_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6501..7265)
DNA (765bp) protein (255aa)
Transcriptional regulator, DeoR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S76_RHOFD rbh
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor Tax=CG_Rhodof_02
DeoR family transcriptional regulator
cg2_3.0_scaffold_1642_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7427..8500
DNA (1074bp) protein (358aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S77_RHOFD rbh
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein Tax=CG_Rhodof_02
ABC transporter-like protein
cg2_3.0_scaffold_1642_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8502..9578
DNA (1077bp) protein (359aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S78_RHOFD rbh
ABC transporter-like protein; K02023 multiple sugar transport system ATP-binding protein Tax=CG_Rhodof_02
ABC transporter-like protein
cg2_3.0_scaffold_1642_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9575..10468
DNA (894bp) protein (298aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S79_RHOFD rbh
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein Tax=CG_Rhodof_02
binding-protein-dependent transport systems inner membrane component
cg2_3.0_scaffold_1642_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10461..11273
DNA (813bp) protein (271aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S80_RHOFD rbh
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=CG_Rhodof_02
binding-protein-dependent transport systems inner membrane component
cg2_3.0_scaffold_1642_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11288..11596
DNA (309bp) protein (103aa)
Putative integral membrane protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S81_RHOFD rbh
putative integral membrane protein Tax=CG_Rhodof_02
putative integral membrane protein
cg2_3.0_scaffold_1642_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11682..13415
DNA (1734bp) protein (578aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12G95_POLSJ rbh
twin-arginine translocation pathway signal protein; K02027 multiple sugar transport system substrate-binding protein Tax=CG_Rhodof_02
twin-arginine translocation pathway signal protein
cg2_3.0_scaffold_1642_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13544..15151
DNA (1608bp) protein (536aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=CG_Rhodof_02
FAD dependent oxidoreductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21S83_RHOFD rbh
FAD dependent oxidoreductase
cg2_3.0_scaffold_1642_c_16
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15336..15704
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Acidovorax RepID=K0I9Z6_9BURK rbh
rplN; 50S ribosomal protein L14 Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
rplN; 50S ribosomal protein L14
cg2_3.0_scaffold_1642_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15714..16034
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RL24_RHOFD rbh
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=CG_Rhodof_02
rplX; 50S ribosomal protein L24
cg2_3.0_scaffold_1642_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16037..16576
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RL5_RHOFD rbh
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=CG_Rhodof_02
rplE; 50S ribosomal protein L5
cg2_3.0_scaffold_1642_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16594..16890
DNA (297bp) protein (99aa)
30S ribosomal protein S14 n=2 Tax=Albidiferax RepID=RS14_RHOFD rbh
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=CG_Rhodof_02
rpsN; 30S ribosomal protein S14
cg2_3.0_scaffold_1642_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16909..17304
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS8_RHOFD rbh
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=CG_Rhodof_02
rpsH; 30S ribosomal protein S8
cg2_3.0_scaffold_1642_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17331..17864
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RL6_RHOFD rbh
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=CG_Rhodof_02
rplF; 50S ribosomal protein L6
cg2_3.0_scaffold_1642_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17876..18241
DNA (366bp) protein (122aa)
50S ribosomal protein L18 n=2 Tax=Acidovorax RepID=RL18_ACIET rbh
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=CG_Rhodof_02
rplR; 50S ribosomal protein L18
cg2_3.0_scaffold_1642_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18260..18784
DNA (525bp) protein (175aa)
30S ribosomal protein S5 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YDW2_9BURK rbh
uncharacterized LOC100203794 Tax=CG_Rhodof_02
rpsE; 30S ribosomal protein S5
cg2_3.0_scaffold_1642_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18799..18981
DNA (183bp) protein (61aa)
50S ribosomal protein L30 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RL30_RHOFD rbh
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=CG_Rhodof_02
50S ribosomal protein L30
cg2_3.0_scaffold_1642_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18992..19423
DNA (432bp) protein (144aa)
50S ribosomal protein L15 n=1 Tax=Acidovorax radicis RepID=UPI0002378375 rbh
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=CG_Rhodof_02
50S ribosomal protein L15
cg2_3.0_scaffold_1642_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19446..20756
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QP3_RHOFD rbh
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=CG_Rhodof_02
secY; preprotein translocase subunit SecY
cg2_3.0_scaffold_1642_c_27
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20768..20986
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Burkholderiales RepID=C5A9H9_BURGB rbh
translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
translation initiation factor IF-1
cg2_3.0_scaffold_1642_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21159..21524
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=RS13_POLNA rbh
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=CG_Rhodof_02
rpsM; 30S ribosomal protein S13
cg2_3.0_scaffold_1642_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22032..22655
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS4_RHOFD rbh
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=CG_Rhodof_02
rpsD; 30S ribosomal protein S4
cg2_3.0_scaffold_1642_c_30
unknown

Not on your lists

22759..22827
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 30 items

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