ggKbase home page

cg2_3.0_scaffold_1236_c

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1236_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170..871)
DNA (702bp) protein (234aa)
Mobilization protein mobd n=2 Tax=Thauera RepID=N6XRL5_9RHOO rbh
hypothetical protein Tax=CG_Rhodof_02
mobilization protein MobD
cg2_3.0_scaffold_1236_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(868..1152)
DNA (285bp) protein (95aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_1236_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1165..2514)
DNA (1350bp) protein (450aa)
Amino-acid acetyltransferase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N5L1_9BURK rbh
argA; amino-acid N-acetyltransferase Tax=CG_Rhodof_02
argA; amino-acid N-acetyltransferase
cg2_3.0_scaffold_1236_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2626..3024
DNA (399bp) protein (133aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_1236_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3021..3443
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI000345A9FD rbh
PilT protein domain protein Tax=CG_Rhodof_02
PilT protein domain protein
cg2_3.0_scaffold_1236_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3434..7597
DNA (4164bp) protein (1388aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] Tax=CG_Rhodof_02
ATP-dependent RNA helicase hrpA n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBB5_9BURK rbh
ATP-dependent helicase HrpA
cg2_3.0_scaffold_1236_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7705..7839
DNA (135bp) protein (45aa)
carbonate dehydratase Tax=CG_Rhodof_02
cg2_3.0_scaffold_1236_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8420
DNA (561bp) protein (187aa)
hypothetical protein Tax=CG_Rhodof_02
uncharacterized protein conserved in bacteria
cg2_3.0_scaffold_1236_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8431..10113
DNA (1683bp) protein (561aa)
sodium/hydrogen exchanger Tax=CG_Rhodof_02
Sodium/hydrogen exchanger id=1329031 bin=GWE1_T_denit_62_9 species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
sodium/hydrogen exchanger
cg2_3.0_scaffold_1236_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10110..11009
DNA (900bp) protein (300aa)
Universal stress protein family n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAA9_AZOSB rbh
uspA; universal stress protein Tax=CG_Rhodof_02
uspA; universal stress protein
cg2_3.0_scaffold_1236_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11176..11643
DNA (468bp) protein (156aa)
Putative signal-transduction protein with CBS domains n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222B0_RHOFD rbh
signal-transduction protein Tax=CG_Rhodof_02
signal-transduction protein
cg2_3.0_scaffold_1236_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11688..12713
DNA (1026bp) protein (342aa)
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=CG_Rhodof_02
acetyl-CoA synthetase (EC:6.2.1.1)
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222B1_RHOFD rbh
cg2_3.0_scaffold_1236_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12729..12971
DNA (243bp) protein (81aa)
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=CG_Rhodof_02
acetyl-CoA synthetase (EC:6.2.1.1)
AMP-dependent synthetase and ligase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12FH5_POLSJ
cg2_3.0_scaffold_1236_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12949..13251
DNA (303bp) protein (101aa)
acetyl-CoA synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] Tax=CG_Rhodof_02
acetyl-CoA synthetase (EC:6.2.1.1)
AMP-dependent synthetase and ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222B1_RHOFD
cg2_3.0_scaffold_1236_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13298..13864)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000374A577 rbh
nitroreductase Tax=CG_Rhodof_02
nitroreductase
cg2_3.0_scaffold_1236_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13888..14313)
DNA (426bp) protein (142aa)
Heat shock protein Hsp20 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y84_RHOFD rbh
heat shock protein Hsp20 Tax=CG_Rhodof_02
heat shock protein Hsp20
cg2_3.0_scaffold_1236_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14332..14562)
DNA (231bp) protein (77aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_1236_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14588..15697
DNA (1110bp) protein (370aa)
Putative PAS/PAC sensor protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y83_RHOFD rbh
putative PAS/PAC sensor protein Tax=CG_Rhodof_02
putative PAS/PAC sensor protein
cg2_3.0_scaffold_1236_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15694..16362
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y82_RHOFD rbh
two component LuxR family transcriptional regulator Tax=CG_Rhodof_02
two component LuxR family transcriptional regulator
cg2_3.0_scaffold_1236_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16546..17337
DNA (792bp) protein (264aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y81_RHOFD rbh
Crp/FNR family transcriptional regulator Tax=CG_Rhodof_02
Crp/FNR family transcriptional regulator
cg2_3.0_scaffold_1236_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17493..20129
DNA (2637bp) protein (879aa)
MCP methyltransferase, CheR-type; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] Tax=CG_Rhodof_02
MCP methyltransferase, CheR-type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U29_RHOFD rbh
MCP methyltransferase, CheR-type
cg2_3.0_scaffold_1236_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20116..21966
DNA (1851bp) protein (617aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U30_RHOFD rbh
PAS/PAC sensor-containing diguanylate cyclase Tax=CG_Rhodof_02
PAS/PAC sensor-containing diguanylate cyclase
cg2_3.0_scaffold_1236_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22065..23222)
DNA (1158bp) protein (386aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WM0_RHOFD rbh
glucose sorbosone dehydrogenase Tax=CG_Rhodof_02
glucose sorbosone dehydrogenase
cg2_3.0_scaffold_1236_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23502..24494)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N8X3_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1236_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24887..26128
DNA (1242bp) protein (414aa)
Monooxygenase, FAD-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T83_RHOFD rbh
salicylate hydroxylase Tax=CG_Rhodof_02
FAD-binding monooxygenase
Displaying 25 items

View Taxonomy