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cg2_3.0_scaffold_385_c

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_385_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2390)
DNA (2388bp) protein (796aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=CG_Rhodof_02
Carbamoyl-phosphate synthase large chain n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX2_RHOFD rbh
carbamoyl-phosphate synthase large subunit
cg2_3.0_scaffold_385_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2410..3084)
DNA (675bp) protein (225aa)
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX3_RHOFD rbh
leucine export protein LeuE; K11250 leucine efflux protein Tax=CG_Rhodof_02
leucine export protein LeuE
cg2_3.0_scaffold_385_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3081..4307)
DNA (1227bp) protein (409aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=CG_Rhodof_02
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX4_RHOFD rbh
cg2_3.0_scaffold_385_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4391..5209)
DNA (819bp) protein (273aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WX5_RHOFD rbh
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family Tax=CG_Rhodof_02
tRNA/rRNA methyltransferase SpoU
cg2_3.0_scaffold_385_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5206..5937)
DNA (732bp) protein (244aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Rhodof_02
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RNH2_RHOFD rbh
cg2_3.0_scaffold_385_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5909..7054)
DNA (1146bp) protein (382aa)
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] Tax=CG_Rhodof_02
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LPXB_RHOFD rbh
cg2_3.0_scaffold_385_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7070..7930)
DNA (861bp) protein (287aa)
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=CG_Rhodof_02
UDP-N-acetylglucosamine acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=uncultured bacterium RepID=K2DYG9_9BACT rbh
cg2_3.0_scaffold_385_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7875..8315)
DNA (441bp) protein (147aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=CG_Rhodof_02
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=uncultured bacterium RepID=K2EK10_9BACT rbh
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
cg2_3.0_scaffold_385_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8315..9316)
DNA (1002bp) protein (334aa)
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; K02536 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] Tax=CG_Rhodof_02
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=LPXD_RHOFD rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
cg2_3.0_scaffold_385_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9340..9771)
DNA (432bp) protein (144aa)
Outer membrane protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N789_9BURK rbh
outer membrane protein Tax=CG_Rhodof_02
outer membrane protein
cg2_3.0_scaffold_385_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9852..12143)
DNA (2292bp) protein (764aa)
Outer membrane protein assembly factor BamA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY2_RHOFD rbh
surface antigen (D15); K07277 outer membrane protein Tax=CG_Rhodof_02
surface antigen (D15)
cg2_3.0_scaffold_385_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12190..13551)
DNA (1362bp) protein (454aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=CG_Rhodof_02
zinc metalloprotease n=1 Tax=Acidovorax radicis RepID=UPI0002375492 rbh
membrane-associated zinc metalloprotease
cg2_3.0_scaffold_385_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13565..14776)
DNA (1212bp) protein (404aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=CG_Rhodof_02
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY4_RHOFD rbh
cg2_3.0_scaffold_385_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14785..15630)
DNA (846bp) protein (282aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] Tax=CG_Rhodof_02
Phosphatidate cytidylyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WY5_RHOFD rbh
phosphatidate cytidylyltransferase
cg2_3.0_scaffold_385_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15640..16368)
DNA (729bp) protein (243aa)
Isoprenyl transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I945_9BURK rbh
undecaprenyl diphosphate synthase Tax=CG_Rhodof_02
undecaprenyl diphosphate synthase
cg2_3.0_scaffold_385_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16375..16935)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RRF_RHOFD rbh
frr; ribosome recycling factor; K02838 ribosome recycling factor Tax=CG_Rhodof_02
frr; ribosome recycling factor
cg2_3.0_scaffold_385_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16999..17721)
DNA (723bp) protein (241aa)
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_Rhodof_02
Uridylate kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PYRH_RHOFD rbh
pyrH; uridylate kinase
cg2_3.0_scaffold_385_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17779..18702)
DNA (924bp) protein (308aa)
Elongation factor Ts n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=EFTS_RHOFD rbh
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=CG_Rhodof_02
tsf; elongation factor Ts
cg2_3.0_scaffold_385_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18792..19544)
DNA (753bp) protein (251aa)
30S ribosomal protein S2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS2_RHOFD rbh
rpsB; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Rhodof_02
rpsB; 30S ribosomal protein S2
cg2_3.0_scaffold_385_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20027..21010)
DNA (984bp) protein (328aa)
Hsp33 protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZM3_9BURK rbh
Hsp33 protein Tax=CG_Rhodof_02
Hsp33 protein
cg2_3.0_scaffold_385_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21122..21652)
DNA (531bp) protein (177aa)
Transferase hexapeptide protein n=1 Tax=uncultured bacterium RepID=K2DM31_9BACT rbh
transferase hexapeptide protein Tax=CG_Rhodof_02
transferase hexapeptide protein
cg2_3.0_scaffold_385_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21701..22567
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZE9_9BACT rbh
COG2833: uncharacterized protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_385_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22582..23529)
DNA (948bp) protein (316aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EL18_9BACT rbh
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=CG_Rhodof_02
tyrosine recombinase XerD
cg2_3.0_scaffold_385_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23629..24543
DNA (915bp) protein (305aa)
Auxin Efflux Carrier n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21V32_RHOFD rbh
auxin efflux carrier; K07088 Tax=CG_Rhodof_02
auxin efflux carrier
cg2_3.0_scaffold_385_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24991..25920)
DNA (930bp) protein (310aa)
Epoxyqueuosine reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T93_RHOFD rbh
putative electron transport protein yjeS-like Tax=CG_Rhodof_02
4Fe-4S cluster-binding
cg2_3.0_scaffold_385_c_26
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26047..26577
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T92_RHOFD rbh
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
hypothetical protein
cg2_3.0_scaffold_385_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26574..27992
DNA (1419bp) protein (473aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28); K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=CG_Rhodof_02
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T91_RHOFD rbh
cg2_3.0_scaffold_385_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27985..28629)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQ27_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_385_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28785..30125
DNA (1341bp) protein (447aa)
Anaerobic C4-dicarboxylate transporter n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SH3_RHOFD rbh
anaerobic c4-dicarboxylate membrane transporter family protein; K07792 anaerobic C4-dicarboxylate transporter DcuB Tax=CG_Rhodof_02
anaerobic c4-dicarboxylate membrane transporter family protein
cg2_3.0_scaffold_385_c_30
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30301..31224
DNA (924bp) protein (308aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XC3_RHOFD rbh
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein Tax=CG_Rhodof_02
glycine betaine ABC transporter substrate-binding protein
Displaying items 1-30 of 41 in total

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