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cg2_3.0_scaffold_659_c

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_659_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..984
DNA (984bp) protein (328aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=CG_Rhodof_02
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW1_RHOFD rbh
cg2_3.0_scaffold_659_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

993..1760
DNA (768bp) protein (256aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW2_RHOFD rbh
UBA/THIF-type NAD/FAD-binding protein Tax=CG_Rhodof_02
UBA/THIF-type NAD/FAD-binding protein
cg2_3.0_scaffold_659_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1772..2257)
DNA (486bp) protein (162aa)
Nuclease (SNase-like) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW3_RHOFD rbh
nuclease Tax=CG_Rhodof_02
nuclease
cg2_3.0_scaffold_659_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2264..2710)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HV68_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3095..3517)
DNA (423bp) protein (141aa)
Bluf domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HXZ5_9BURK rbh
bluf domain-containing protein Tax=CG_Rhodof_02
bluf domain-containing protein
cg2_3.0_scaffold_659_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3520..4221)
DNA (702bp) protein (234aa)
GTP cyclohydrolase I (EC:3.5.4.16); K01495 GTP cyclohydrolase I [EC:3.5.4.16] Tax=CG_Rhodof_02
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW8_RHOFD rbh
cg2_3.0_scaffold_659_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4326..5546)
DNA (1221bp) protein (407aa)
phospholipase D/transphosphatidylase; K06132 putative cardiolipin synthase [EC:2.7.8.-] Tax=CG_Rhodof_02
Phospholipase D/Transphosphatidylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YW9_RHOFD rbh
phospholipase D/transphosphatidylase
cg2_3.0_scaffold_659_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5546..6280)
DNA (735bp) protein (245aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX0_RHOFD rbh
endonuclease/exonuclease/phosphatase; K06896 Tax=CG_Rhodof_02
endonuclease/exonuclease/phosphatase
cg2_3.0_scaffold_659_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6277..6765)
DNA (489bp) protein (163aa)
ntpA; dATP pyrophosphohydrolase; K08310 dATP pyrophosphohydrolase [EC:3.6.1.-] Tax=CG_Rhodof_02
NUDIX hydrolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX1_RHOFD rbh
ntpA; dATP pyrophosphohydrolase
cg2_3.0_scaffold_659_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6898..8694)
DNA (1797bp) protein (599aa)
aspS; aspartyl-tRNA ligase (EC:6.1.1.12) Tax=CG_Rhodof_02
aspS; aspartyl-tRNA ligase (EC:6.1.1.12) id=12549964 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
aspS; aspartyl-tRNA ligase (EC:6.1.1.12)
cg2_3.0_scaffold_659_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8751..9389)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX3_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9412..9738)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX4_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9820..11388)
DNA (1569bp) protein (523aa)
ubiquinone biosynthesis protein UbiB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036CE464 rbh
ubiB; putative ubiquinone biosynthesis protein UbiB; K03688 ubiquinone biosynthesis protein Tax=CG_Rhodof_02
ubiB; putative ubiquinone biosynthesis protein UbiB
cg2_3.0_scaffold_659_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11385..11945)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX6_RHOFD rbh
hypothetical protein; K03690 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11972..12952)
DNA (981bp) protein (327aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX7_RHOFD rbh
import inner membrane translocase subunit Tim44 Tax=CG_Rhodof_02
import inner membrane translocase subunit Tim44
cg2_3.0_scaffold_659_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13011..13742)
DNA (732bp) protein (244aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201] Tax=CG_Rhodof_02
ubiquinone/menaquinone biosynthesis methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00036E9023 rbh
ubiquinone/menaquinone biosynthesis methyltransferase
cg2_3.0_scaffold_659_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13822..14235)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YX9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14268..18164)
DNA (3897bp) protein (1299aa)
FAD linked oxidase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YY1_RHOFD rbh
FAD linked oxidase-like protein Tax=CG_Rhodof_02
FAD linked oxidase-like protein
cg2_3.0_scaffold_659_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18394..19176)
DNA (783bp) protein (261aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03785 3-dehydroquinate dehydratase I [EC:4.2.1.10] Tax=CG_Rhodof_02
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=AROD_RHOFD rbh
cg2_3.0_scaffold_659_c_trna_2
unknown

Not on your lists

comp(19255..19328)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_659_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19377..20381)
DNA (1005bp) protein (335aa)
Heat-inducible transcription repressor HrcA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=HRCA_RHOFD rbh
hrcA; heat-inducible transcription repressor; K03705 heat-inducible transcriptional repressor Tax=CG_Rhodof_02
hrcA; heat-inducible transcription repressor
cg2_3.0_scaffold_659_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20410..21312
DNA (903bp) protein (301aa)
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23] Tax=CG_Rhodof_02
ppnK; NAD(+)/NADH kinase family protein (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=PPNK_RHOFD rbh
cg2_3.0_scaffold_659_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21309..22961
DNA (1653bp) protein (551aa)
DNA repair protein RecN n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XX1_RHOFD rbh
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=CG_Rhodof_02
DNA repair protein RecN
cg2_3.0_scaffold_659_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22968..23861
DNA (894bp) protein (298aa)
UPF0042 nucleotide-binding protein Rfer_1653 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y1653_RHOFD rbh
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23827..24870)
DNA (1044bp) protein (348aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=CG_Rhodof_02
A/G-specific DNA-adenine glycosylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XW9_RHOFD rbh
A/G-specific adenine glycosylase
cg2_3.0_scaffold_659_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24895..25710)
DNA (816bp) protein (272aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=CG_Rhodof_02
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase n=1 Tax=Variovorax paradoxus (strain S110) RepID=FPG_VARPS rbh
cg2_3.0_scaffold_659_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25731..27485
DNA (1755bp) protein (585aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XW6_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_659_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27482..27982
DNA (501bp) protein (167aa)
Putative outer membrane lipoprotein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XW5_RHOFD rbh
putative outer membrane lipoprotein; K02494 outer membrane lipoprotein LolB Tax=CG_Rhodof_02
putative outer membrane lipoprotein
cg2_3.0_scaffold_659_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28001..28837
DNA (837bp) protein (279aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=CG_Rhodof_02
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ISPE_RHOFD rbh
cg2_3.0_scaffold_659_c_trna_1
unknown

Not on your lists

28874..28947
DNA (74bp)
transferRNA
Displaying items 1-30 of 38 in total

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