ggKbase home page

cg2_3.0_scaffold_3389_c

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3389_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..771)
DNA (771bp) protein (257aa)
NADH-ubiquinone oxidoreductase, chain 49kDa n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB4_RHOFD
NADH-ubiquinone oxidoreductase subunit 49kDa Tax=CG_Rhodof_02
NADH-ubiquinone oxidoreductase subunit 49kDa
cg2_3.0_scaffold_3389_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(776..2254)
DNA (1479bp) protein (493aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB5_RHOFD rbh
NADH/ubiquinone/plastoquinone (complex I) Tax=CG_Rhodof_02
NADH/ubiquinone/plastoquinone (complex I)
cg2_3.0_scaffold_3389_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2251..2394)
DNA (144bp) protein (48aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_3389_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2530..3123)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB6_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3389_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3120..4052)
DNA (933bp) protein (311aa)
NAD-dependent dehydrogenase subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB7_RHOFD rbh
NAD-dependent dehydrogenase subunit Tax=CG_Rhodof_02
NAD-dependent dehydrogenase subunit
cg2_3.0_scaffold_3389_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4049..6067)
DNA (2019bp) protein (673aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5); K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5] Tax=CG_Rhodof_02
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TB8_RHOFD rbh
cg2_3.0_scaffold_3389_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(6430..8526)
DNA (2097bp) protein (699aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=CG_Rhodof_02
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00030D5D83 rbh
cg2_3.0_scaffold_3389_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8561..9874)
DNA (1314bp) protein (438aa)
Patatin protein n=1 Tax=uncultured organism RepID=D8VMM7_9ZZZZ rbh
patatin; K07001 NTE family protein Tax=CG_Rhodof_02
patatin
cg2_3.0_scaffold_3389_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9999..11090
DNA (1092bp) protein (364aa)
Putative iron sulfur binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TC2_RHOFD rbh
putative iron sulfur-binding protein; K03593 ATP-binding protein involved in chromosome partitioning Tax=CG_Rhodof_02
putative iron sulfur-binding protein
cg2_3.0_scaffold_3389_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11122..11814)
DNA (693bp) protein (231aa)
peptide methionine sulfoxide reductase (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] Tax=CG_Rhodof_02
peptide methionine sulfoxide reductase (EC:1.8.4.11)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00035EB190 rbh
cg2_3.0_scaffold_3389_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11919..12614
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri RCH2 RepID=L0GKQ9_PSEST rbh
dehydrogenase Tax=CG_Rhodof_02
dehydrogenase
cg2_3.0_scaffold_3389_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13182..13685
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TT3_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3389_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13854..14492
DNA (639bp) protein (213aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CG_Rhodof_02
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=HIS7_RHOFD rbh
cg2_3.0_scaffold_3389_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14542..15225
DNA (684bp) protein (228aa)
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=CG_Rhodof_02
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21U93_RHOFD rbh
hisH; imidazole glycerol phosphate synthase subunit HisH
cg2_3.0_scaffold_3389_c_15
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15291..15443
DNA (153bp) protein (51aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y868_9BURK rbh
Displaying 15 items

View Taxonomy