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cg2_3.0_scaffold_4676_c

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_4676_c_1
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..178
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKM8_METPP rbh
hypothetical protein Tax=RBG_16_Gallionellales_56_9_curated
hypothetical protein
cg2_3.0_scaffold_4676_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(339..2330)
DNA (1992bp) protein (664aa)
Sigma-54-dependent transcriptional regulator n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KCD5_AZOSB rbh
sigma-54-dependent transcriptional regulator Tax=CG_Rhodof_02
sigma-54-dependent transcriptional regulator
cg2_3.0_scaffold_4676_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2534..3070)
DNA (537bp) protein (179aa)
Putative transcriptional regulatory protein NadR (Probably AsnC-family) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TE7_RHOFD rbh
transcriptional regulatory protein NadR Tax=CG_Rhodof_02
transcriptional regulatory protein NadR
cg2_3.0_scaffold_4676_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3063..4385)
DNA (1323bp) protein (441aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=CG_Rhodof_02
Serine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=SYS_RHOFD rbh
seryl-tRNA synthetase
cg2_3.0_scaffold_4676_c_5
unknown

Not on your lists

comp(4391..4639)
DNA (249bp) protein (83aa)

This feature has no annotations

cg2_3.0_scaffold_4676_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4611..5585)
DNA (975bp) protein (325aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=CG_Rhodof_02
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I783_9BURK
cg2_3.0_scaffold_4676_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5582..6046)
DNA (465bp) protein (155aa)
FKBP-type peptidylprolyl isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] Tax=CG_Rhodof_02
Peptidylprolyl isomerase, FKBP-type n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TE5_RHOFD rbh
FKBP-type peptidylprolyl isomerase
cg2_3.0_scaffold_4676_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6119..6820
DNA (702bp) protein (234aa)
UPF0758 protein Rfer_3252 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y3252_RHOFD
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=CG_Rhodof_02
radC; DNA repair protein RadC
cg2_3.0_scaffold_4676_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6817..7470
DNA (654bp) protein (218aa)
Smr protein/MutS2 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TE1_RHOFD
Smr protein/MutS2 Tax=CG_Rhodof_02
Smr protein/MutS2
cg2_3.0_scaffold_4676_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7550..7939
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Providencia stuartii RepID=I0DQG5_PROSM rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_4676_c_trna_1
unknown

Not on your lists

comp(8096..8169)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_4676_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8221..8655)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MS13_9BURK rbh
hypothetical protein; K06886 hemoglobin Tax=CG_Rhodof_02
globin-like protein
cg2_3.0_scaffold_4676_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8645..11719)
DNA (3075bp) protein (1025aa)
Type III restriction protein res subunit (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZYP9_9ZZZZ rbh
restriction endonuclease Tax=CG_Rhodof_02
restriction endonuclease
cg2_3.0_scaffold_4676_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11716..12117)
DNA (402bp) protein (134aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZTF6_THETH rbh
nucleotidyltransferase substrate binding protein, HI0074 family Tax=CG_Rhodof_02
nucleotidyltransferase substrate binding protein
cg2_3.0_scaffold_4676_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12121..12744)
DNA (624bp) protein (208aa)
DNA methylase N-4/N-6 domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZGA9_9ZZZZ rbh
type III restriction-modification system RcaSBIIP, Mod subunit Tax=CG_Rhodof_02
type III restriction-modification system RcaSBIIP, Mod subunit
Displaying 15 items

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