name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cg2_3.0_scaffold_590_c_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
50..442
|
30S ribosomal protein S9 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS9_RHOFD
rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
30S ribosomal protein S9
|
|
cg2_3.0_scaffold_590_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
625..987
|
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Acidovorax sp. CF316 RepID=J0U517_9BURK
rbh
iron-sulfur cluster insertion protein ErpA Tax=CG_Rhodof_02
iron-sulfur cluster insertion protein ErpA
|
|
cg2_3.0_scaffold_590_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1007..2122)
|
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=CG_Rhodof_02
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ANMK_RHOFD
rbh
anmK; anhydro-N-acetylmuramic acid kinase
|
|
cg2_3.0_scaffold_590_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2142..3533)
|
Peptidase M23B n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S6_RHOFD
rbh
peptidase M23B Tax=CG_Rhodof_02
peptidase M23B
|
|
cg2_3.0_scaffold_590_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3673..4917
|
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S5_RHOFD
rbh
|
|
cg2_3.0_scaffold_590_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4940..5416
|
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=CG_Rhodof_02
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=DTD_POLNA
rbh
D-tyrosyl-tRNA(Tyr) deacylase
|
|
cg2_3.0_scaffold_590_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5426..6580
|
Rod shape-determining protein RodA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T23_RHOFD
rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Rhodof_02
rod shape-determining protein RodA
|
|
cg2_3.0_scaffold_590_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6659..8119
|
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T25_RHOFD
rbh
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=CG_Rhodof_02
peptidase U62, modulator of DNA gyrase
|
|
cg2_3.0_scaffold_590_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8418..9560
|
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=CG_Rhodof_02
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T27_RHOFD
rbh
|
|
cg2_3.0_scaffold_590_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9610..10959)
|
UDP-N-acetylmuramate; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=CG_Rhodof_02
UDP-N-acetylmuramate n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T38_RHOFD
rbh
UDP-N-acetylmuramate
|
|
cg2_3.0_scaffold_590_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11085..11678
|
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T39_RHOFD
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
|
|
cg2_3.0_scaffold_590_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11675..12226
|
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7M0_ACIDE
rbh
putative thioredoxin-like protein transmembrane protein Tax=CG_Rhodof_02
putative thioredoxin-like protein transmembrane protein
|
|
cg2_3.0_scaffold_590_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12350..12808
|
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7M1_ACIDE
rbh
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=CG_Rhodof_02
acetyl-CoA carboxylase, biotin carboxyl carrier protein
|
|
cg2_3.0_scaffold_590_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12824..14173
|
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=CG_Rhodof_02
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T42_RHOFD
rbh
acetyl-CoA carboxylase, biotin carboxylase
|
|
cg2_3.0_scaffold_590_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14187..15080
|
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=CG_Rhodof_02
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T43_RHOFD
rbh
prmA; 50S ribosomal protein L11 methyltransferase
|
|
cg2_3.0_scaffold_590_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15117..15959
|
thioredoxin n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375DC1
rbh
thioredoxin-like protein Tax=CG_Rhodof_02
thioredoxin-like protein
|
|
cg2_3.0_scaffold_590_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16628..17836)
|
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] Tax=CG_Rhodof_02
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T46_RHOFD
rbh
|
|
cg2_3.0_scaffold_590_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17963..20878)
|
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=CG_Rhodof_02
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T47_RHOFD
rbh
|
|
cg2_3.0_scaffold_590_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21137..21781)
|
Negative regulator of beta-lactamase expression n=1 Tax=Variovorax sp. CF313 RepID=J2TF17_9BURK
rbh
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein Tax=CG_Rhodof_02
N-acetyl-anhydromuranmyl-L-alanine amidase
|
|
cg2_3.0_scaffold_590_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21741..23189)
|
Candidate response regulator, NtrC n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y015_RAMTT
rbh
response regulator NtrC; K02667 two-component system, NtrC family, response regulator PilR Tax=CG_Rhodof_02
response regulator NtrC
|
|
cg2_3.0_scaffold_590_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23186..24928)
|
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=CG_Rhodof_02
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T50_RHOFD
rbh
multi-sensor signal transduction histidine kinase
|
|
cg2_3.0_scaffold_590_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25156..25959)
|
Cytochrome c assembly protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T51_RHOFD
rbh
cytochrome c assembly protein Tax=CG_Rhodof_02
cytochrome c assembly protein
|
|
cg2_3.0_scaffold_590_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26038..27411
|
Signal recognition particle protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T52_RHOFD
rbh
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=CG_Rhodof_02
signal recognition particle protein
|
|
cg2_3.0_scaffold_590_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27428..28195)
|
Tax=CG_Rhodof_02
|
|
cg2_3.0_scaffold_590_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28263..28967)
|
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z47_RHOFD
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
|
|
cg2_3.0_scaffold_590_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28964..29941)
|
ABC-type transport system periplasmic component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z46_RHOFD
rbh
ABC-type transport system periplasmic component Tax=CG_Rhodof_02
ABC-type transport system periplasmic component
|
|
cg2_3.0_scaffold_590_c_27
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29960..30754)
|
ABC-type transport system ipermease component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z45_RHOFD
rbh
ABC-type transport system permease Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
ABC-type transport system permease
|
|
cg2_3.0_scaffold_590_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30897..31136
|
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW9_9BURK
rbh
hypothetical protein Tax=CG_Rhodof_02
putative uncharacterized protein
|
|
cg2_3.0_scaffold_590_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31133..31564
|
Nucleic acid binding protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPD3_9DELT
rbh
putative toxin-antitoxin system toxin component, PIN family
Nucleic acid binding protein Tax=CG_Rhodof_02
|
|
cg2_3.0_scaffold_590_c_30
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31573..33939)
|
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WZ5_RHOFD
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_02
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
|