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cg2_3.0_scaffold_590_c

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_590_c_1
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


50..442
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=RS9_RHOFD rbh
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
30S ribosomal protein S9
cg2_3.0_scaffold_590_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

625..987
DNA (363bp) protein (121aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Acidovorax sp. CF316 RepID=J0U517_9BURK rbh
iron-sulfur cluster insertion protein ErpA Tax=CG_Rhodof_02
iron-sulfur cluster insertion protein ErpA
cg2_3.0_scaffold_590_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1007..2122)
DNA (1116bp) protein (372aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=CG_Rhodof_02
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=ANMK_RHOFD rbh
anmK; anhydro-N-acetylmuramic acid kinase
cg2_3.0_scaffold_590_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2142..3533)
DNA (1392bp) protein (464aa)
Peptidase M23B n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S6_RHOFD rbh
peptidase M23B Tax=CG_Rhodof_02
peptidase M23B
cg2_3.0_scaffold_590_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3673..4917
DNA (1245bp) protein (415aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=CG_Rhodof_02
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220S5_RHOFD rbh
cg2_3.0_scaffold_590_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4940..5416
DNA (477bp) protein (159aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-] Tax=CG_Rhodof_02
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=DTD_POLNA rbh
D-tyrosyl-tRNA(Tyr) deacylase
cg2_3.0_scaffold_590_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5426..6580
DNA (1155bp) protein (385aa)
Rod shape-determining protein RodA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T23_RHOFD rbh
rod shape-determining protein RodA; K05837 rod shape determining protein RodA Tax=CG_Rhodof_02
rod shape-determining protein RodA
cg2_3.0_scaffold_590_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6659..8119
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T25_RHOFD rbh
peptidase U62, modulator of DNA gyrase; K03568 TldD protein Tax=CG_Rhodof_02
peptidase U62, modulator of DNA gyrase
cg2_3.0_scaffold_590_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8418..9560
DNA (1143bp) protein (381aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=CG_Rhodof_02
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T27_RHOFD rbh
cg2_3.0_scaffold_590_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9610..10959)
DNA (1350bp) protein (450aa)
UDP-N-acetylmuramate; K02558 UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.-] Tax=CG_Rhodof_02
UDP-N-acetylmuramate n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T38_RHOFD rbh
UDP-N-acetylmuramate
cg2_3.0_scaffold_590_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11085..11678
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T39_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_590_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11675..12226
DNA (552bp) protein (184aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7M0_ACIDE rbh
putative thioredoxin-like protein transmembrane protein Tax=CG_Rhodof_02
putative thioredoxin-like protein transmembrane protein
cg2_3.0_scaffold_590_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12350..12808
DNA (459bp) protein (153aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7M1_ACIDE rbh
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein Tax=CG_Rhodof_02
acetyl-CoA carboxylase, biotin carboxyl carrier protein
cg2_3.0_scaffold_590_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12824..14173
DNA (1350bp) protein (450aa)
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] Tax=CG_Rhodof_02
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T42_RHOFD rbh
acetyl-CoA carboxylase, biotin carboxylase
cg2_3.0_scaffold_590_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14187..15080
DNA (894bp) protein (298aa)
prmA; 50S ribosomal protein L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-] Tax=CG_Rhodof_02
Ribosomal protein L11 methyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T43_RHOFD rbh
prmA; 50S ribosomal protein L11 methyltransferase
cg2_3.0_scaffold_590_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15117..15959
DNA (843bp) protein (281aa)
thioredoxin n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375DC1 rbh
thioredoxin-like protein Tax=CG_Rhodof_02
thioredoxin-like protein
cg2_3.0_scaffold_590_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16628..17836)
DNA (1209bp) protein (403aa)
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] Tax=CG_Rhodof_02
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T46_RHOFD rbh
cg2_3.0_scaffold_590_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17963..20878)
DNA (2916bp) protein (972aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=CG_Rhodof_02
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T47_RHOFD rbh
cg2_3.0_scaffold_590_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21137..21781)
DNA (645bp) protein (215aa)
Negative regulator of beta-lactamase expression n=1 Tax=Variovorax sp. CF313 RepID=J2TF17_9BURK rbh
N-acetyl-anhydromuranmyl-L-alanine amidase; K03806 AmpD protein Tax=CG_Rhodof_02
N-acetyl-anhydromuranmyl-L-alanine amidase
cg2_3.0_scaffold_590_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21741..23189)
DNA (1449bp) protein (483aa)
Candidate response regulator, NtrC n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y015_RAMTT rbh
response regulator NtrC; K02667 two-component system, NtrC family, response regulator PilR Tax=CG_Rhodof_02
response regulator NtrC
cg2_3.0_scaffold_590_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23186..24928)
DNA (1743bp) protein (581aa)
multi-sensor signal transduction histidine kinase; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=CG_Rhodof_02
Multi-sensor signal transduction histidine kinase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T50_RHOFD rbh
multi-sensor signal transduction histidine kinase
cg2_3.0_scaffold_590_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25156..25959)
DNA (804bp) protein (268aa)
Cytochrome c assembly protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T51_RHOFD rbh
cytochrome c assembly protein Tax=CG_Rhodof_02
cytochrome c assembly protein
cg2_3.0_scaffold_590_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


26038..27411
DNA (1374bp) protein (458aa)
Signal recognition particle protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21T52_RHOFD rbh
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=CG_Rhodof_02
signal recognition particle protein
cg2_3.0_scaffold_590_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27428..28195)
DNA (768bp) protein (256aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_590_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28263..28967)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z47_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_590_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28964..29941)
DNA (978bp) protein (326aa)
ABC-type transport system periplasmic component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z46_RHOFD rbh
ABC-type transport system periplasmic component Tax=CG_Rhodof_02
ABC-type transport system periplasmic component
cg2_3.0_scaffold_590_c_27
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29960..30754)
DNA (795bp) protein (265aa)
ABC-type transport system ipermease component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z45_RHOFD rbh
ABC-type transport system permease Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
ABC-type transport system permease
cg2_3.0_scaffold_590_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30897..31136
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW9_9BURK rbh
hypothetical protein Tax=CG_Rhodof_02
putative uncharacterized protein
cg2_3.0_scaffold_590_c_29
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31133..31564
DNA (432bp) protein (144aa)
Nucleic acid binding protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPD3_9DELT rbh
putative toxin-antitoxin system toxin component, PIN family
Nucleic acid binding protein Tax=CG_Rhodof_02
cg2_3.0_scaffold_590_c_30
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31573..33939)
DNA (2367bp) protein (789aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WZ5_RHOFD
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=CG_Rhodof_02
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Displaying items 1-30 of 32 in total

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