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cg2_3.0_scaffold_3018_c

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_3018_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..425
DNA (423bp) protein (141aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=CG_Rhodof_02
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TJ9_RHOFD rbh
short-chain dehydrogenase/reductase SDR
cg2_3.0_scaffold_3018_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(471..1154)
DNA (684bp) protein (228aa)
UPF0502 protein Rfer_1648 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y1648_RHOFD rbh
hypothetical protein; K09915 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3018_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1168..1764
DNA (597bp) protein (199aa)
purN; phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] Tax=CG_Rhodof_02
Phosphoribosylglycinamide formyltransferase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XX4_RHOFD rbh
purN; phosphoribosylglycinamide formyltransferase
cg2_3.0_scaffold_3018_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1761..2600)
DNA (840bp) protein (280aa)
Hemerythrin-like, metal-binding n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YG9_RHOFD rbh
hemerythrin-like protein, metal-binding Tax=CG_Rhodof_02
hemerythrin-like protein, metal-binding
cg2_3.0_scaffold_3018_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2623..3828)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK7_RHOFD rbh
hypothetical protein; K02004 putative ABC transport system permease protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_3018_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3830..4573)
DNA (744bp) protein (248aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK8_RHOFD rbh
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein Tax=CG_Rhodof_02
ABC transporter-like protein
cg2_3.0_scaffold_3018_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4570..5895)
DNA (1326bp) protein (442aa)
Secretion protein HlyD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TK9_RHOFD rbh
secretion protein HlyD; K02005 HlyD family secretion protein Tax=CG_Rhodof_02
secretion protein HlyD
cg2_3.0_scaffold_3018_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5918..7249)
DNA (1332bp) protein (444aa)
RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TL0_RHOFD rbh
RND efflux system outer membrane lipoprotein NodT Tax=CG_Rhodof_02
RND efflux system outer membrane lipoprotein NodT
cg2_3.0_scaffold_3018_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7450..8721
DNA (1272bp) protein (424aa)
Fmu (Sun); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=CG_Rhodof_02
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y9A6_9BURK rbh
Fmu (Sun)
cg2_3.0_scaffold_3018_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8827..10044
DNA (1218bp) protein (406aa)
fatty acid desaturase; K00507 stearoyl-CoA desaturase (delta-9 desaturase) [EC:1.14.19.1] Tax=CG_Rhodof_02
Fatty acid desaturase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TL2_RHOFD rbh
fatty acid desaturase
cg2_3.0_scaffold_3018_c_trna_1
unknown

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10187..10260
DNA (74bp)
transferRNA
cg2_3.0_scaffold_3018_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10329..11114)
DNA (786bp) protein (262aa)
short-chain dehydrogenase/reductase SDR; K00208 enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9] Tax=CG_Rhodof_02
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WK2_RHOFD rbh
short-chain dehydrogenase/reductase SDR
cg2_3.0_scaffold_3018_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11168..13057
DNA (1890bp) protein (630aa)
Extracellular solute-binding protein, family 5 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WK1_RHOFD rbh
extracellular solute-binding protein; K13893 microcin C transport system substrate-binding protein Tax=CG_Rhodof_02
extracellular solute-binding protein
cg2_3.0_scaffold_3018_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13061..14095
DNA (1035bp) protein (345aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WK0_RHOFD rbh
binding-protein-dependent transport systems inner membrane component; K13894 microcin C transport system permease protein Tax=CG_Rhodof_02
binding-protein-dependent transport systems inner membrane component
cg2_3.0_scaffold_3018_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14237..15286
DNA (1050bp) protein (350aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WJ9_RHOFD rbh
binding-protein-dependent transport systems inner membrane component; K13895 microcin C transport system permease protein Tax=CG_Rhodof_02
binding-protein-dependent transport systems inner membrane component
cg2_3.0_scaffold_3018_c_15
RLO_Rhodoferax_60_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15283..16827
DNA (1545bp) protein (515aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EFC7_9BACT rbh
ABC transporter-like protein; K13896 microcin C transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated
ABC transporter-like protein
Displaying 16 items

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