ggKbase home page

cg2_3.0_scaffold_1143_c

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_1143_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1392)
DNA (1392bp) protein (464aa)
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=CG_Rhod
UDP-N-acetylglucosamine pyrophosphorylase (EC:2.7.7.23)
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=UPI000059A373 rbh
cg2_3.0_scaffold_1143_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1490..1924
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000313FE7E rbh
CoA-binding domain-containing protein; K06929 Tax=CG_Rhodof_02
putative CoA-binding protein
cg2_3.0_scaffold_1143_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2266..2670)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M3_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1143_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2667..3974)
DNA (1308bp) protein (436aa)
putative RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=CG_Rhodof_02
Putative RNA methylase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M4_RHOFD rbh
putative RNA methylase
cg2_3.0_scaffold_1143_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..5709)
DNA (1593bp) protein (531aa)
RNA polymerase sigma-54 factor n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M5_RHOFD rbh
sigma-54 (RpoN); K03092 RNA polymerase sigma-54 factor Tax=CG_Rhodof_02
sigma-54 (RpoN)
cg2_3.0_scaffold_1143_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5709..6506)
DNA (798bp) protein (266aa)
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=CG_Rhodof_02
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M6_RHOFD rbh
ABC transporter-like protein
cg2_3.0_scaffold_1143_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6512..7147)
DNA (636bp) protein (212aa)
OstA-like protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M7_RHOFD rbh
OstA-like protein; K09774 lipopolysaccharide export system protein LptA Tax=CG_Rhodof_02
OstA-like protein
cg2_3.0_scaffold_1143_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7227..7898)
DNA (672bp) protein (224aa)
Thiol:disulfide interchange protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YEX7_9BURK rbh
DSBA oxidoreductase; K03673 thiol:disulfide interchange protein DsbA Tax=CG_Rhodof_02
DSBA oxidoreductase
cg2_3.0_scaffold_1143_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7956..8555)
DNA (600bp) protein (200aa)
Sporulation related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q220M9_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1143_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8579..10276)
DNA (1698bp) protein (566aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_Rhodof_02
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=SYR_RHOFD rbh
cg2_3.0_scaffold_1143_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10286..11293)
DNA (1008bp) protein (336aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=CG_Rhodof_02
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD94_9BURK rbh
phage SPO1 DNA polymerase-like protein
cg2_3.0_scaffold_1143_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..11793)
DNA (504bp) protein (168aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD51_ACIDE rbh
ribosomal-protein-alanine acetyltransferase Tax=CG_Rhodof_02
ribosomal-protein-alanine acetyltransferase
cg2_3.0_scaffold_1143_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11790..12503)
DNA (714bp) protein (238aa)
peptidase M22, glycoprotease; K14742 hypothetical protease [EC:3.4.-.-] Tax=CG_Rhodof_02
Peptidase M22, glycoprotease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222V6_RHOFD rbh
peptidase M22, glycoprotease
cg2_3.0_scaffold_1143_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12500..13516)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222V5_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1143_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13586..15250)
DNA (1665bp) protein (555aa)
HD-GYP domain protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAN2_9BURK rbh
HD-GYP domain protein Tax=CG_Rhodof_02
HD-GYP domain protein
cg2_3.0_scaffold_1143_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15284..16129)
DNA (846bp) protein (282aa)
hypothetical protein; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=CG_Rhodof_02
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TC75_ACIDE rbh
hypothetical protein
cg2_3.0_scaffold_1143_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16335..17114)
DNA (780bp) protein (260aa)
UPF0246 protein Rfer_2372 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Y2372_RHOFD rbh
hypothetical protein; K09861 hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1143_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17140..17424)
DNA (285bp) protein (95aa)
StaB n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AN83_BURGB rbh
StaB protein Tax=CG_Rhodof_02
StaB protein
cg2_3.0_scaffold_1143_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17421..17918)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5AN84_BURGB rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_1143_c_20
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18329..18892
DNA (564bp) protein (188aa)
alkyl hydroperoxide reductase subunit C n=1 Tax=Methylophilus methylotrophus RepID=UPI0003680544 rbh
Peroxiredoxin Tax=CG_Rhodof_02
Peroxiredoxin
cg2_3.0_scaffold_1143_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19015..20622
DNA (1608bp) protein (536aa)
Alkyl hydroperoxide reductase subunit F n=1 Tax=Acidovorax sp. KKS102 RepID=K0HQL7_9BURK rbh
alkyl hydroperoxide reductase subunit F Tax=CG_Rhodof_02
alkyl hydroperoxide reductase subunit F
cg2_3.0_scaffold_1143_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20654..21859)
DNA (1206bp) protein (402aa)
ATPase-like protein Tax=CG_Rhodof_02
predicted ATPase AAA+ superfamily
cg2_3.0_scaffold_1143_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22083..25025
DNA (2943bp) protein (981aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Rhodof_02
Valine--tRNA ligase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21VW0_RHOFD rbh
valyl-tRNA synthetase
cg2_3.0_scaffold_1143_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25028..26269)
DNA (1242bp) protein (414aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=CG_Rhodof_02
D-3-phosphoglycerate dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XB0_RHOFD rbh
D-3-phosphoglycerate dehydrogenase
cg2_3.0_scaffold_1143_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26320..26793)
DNA (474bp) protein (158aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XB1_RHOFD rbh
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor Tax=CG_Rhodof_02
BadM/Rrf2 family transcriptional regulator
cg2_3.0_scaffold_1143_c_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26831..27100)
DNA (270bp) protein (90aa)
Nitrogen-fixing NifU-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XB2_RHOFD
nitrogen-fixing NifU-like protein
Nitrogen-fixing NifU-like {ECO:0000313|EMBL:ABD69591.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferriredu
Displaying 26 items

View Taxonomy