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cg2_3.0_scaffold_669_c

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cg2_3.0_scaffold_669_c_trna_1
unknown

Not on your lists

137..207
DNA (71bp)
transferRNA
cg2_3.0_scaffold_669_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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310..798
DNA (489bp) protein (163aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=CG_Rhodof_02
Protein tyrosine phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SY4_RHOFD rbh
protein tyrosine phosphatase
cg2_3.0_scaffold_669_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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912..1217
DNA (306bp) protein (102aa)
Tax=CG_Rhodof_02
cg2_3.0_scaffold_669_c_trna_2
unknown

Not on your lists

comp(1424..1497)
DNA (74bp)
transferRNA
cg2_3.0_scaffold_669_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1631..2389
DNA (759bp) protein (253aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUD7_9BURK rbh
short-chain dehydrogenase/reductase SDR Tax=CG_Rhodof_02
short-chain dehydrogenase/reductase SDR
cg2_3.0_scaffold_669_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2433..4298
DNA (1866bp) protein (622aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=CG_Rhodof_02
DNA primase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WC6_RHOFD rbh
DNA primase
cg2_3.0_scaffold_669_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4543..6879
DNA (2337bp) protein (779aa)
RNA polymerase sigma factor RpoD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y63_RHOFD rbh
sigma 70 (RpoD); K03086 RNA polymerase primary sigma factor Tax=CG_Rhodof_02
sigma 70 (RpoD)
cg2_3.0_scaffold_669_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6903..7427
DNA (525bp) protein (175aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPE4_ACCPU rbh
ubiquinol-cytochrome c reductase, iron-sulfur subunit Tax=CG_Rhodof_02
ubiquinol-cytochrome c reductase, iron-sulfur subunit
cg2_3.0_scaffold_669_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7536..8606
DNA (1071bp) protein (357aa)
cobalamin (vitamin B12) biosynthesis protein CbiM; K02007 cobalt/nickel transport system permease protein Tax=CG_Rhodof_02
cobalamin (vitamin B12) biosynthesis protein CbiM
cg2_3.0_scaffold_669_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8603..9412
DNA (810bp) protein (270aa)
Cobalt ABC transporter, inner membrane subunit CbiQ n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LH93_SYNFM rbh
cobalt ABC transporter inner membrane subunit CbiQ; K02008 cobalt/nickel transport system permease protein Tax=CG_Rhodof_02
cobalt ABC transporter inner membrane subunit CbiQ
cg2_3.0_scaffold_669_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9409..10146
DNA (738bp) protein (246aa)
Cobalt ABC transporter, ATPase subunit n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RGH2_DESPD rbh
cobalt ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein Tax=CG_Rhodof_02
cobalt ABC transporter ATPase
cg2_3.0_scaffold_669_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10164..10658)
DNA (495bp) protein (165aa)
Putative nickel-responsive regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1P7_9PROT rbh
nikR; putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain Tax=CG_Rhodof_02
nickel responsive regulator
cg2_3.0_scaffold_669_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10864..12045
DNA (1182bp) protein (394aa)
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=CG_Rhodof_02
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit (HydA) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R17_RHOFD rbh
cg2_3.0_scaffold_669_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12048..13043
DNA (996bp) protein (332aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R16_RHOFD rbh
hydrogenase 2 protein HybA Tax=CG_Rhodof_02
hydrogenase 2 protein HybA
cg2_3.0_scaffold_669_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13040..14206
DNA (1167bp) protein (389aa)
Polysulphide reductase, NrfD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R15_RHOFD rbh
putative hydrogenase 2 b cytochrome subunit Tax=CG_Rhodof_02
putative hydrogenase 2 b cytochrome subunit
cg2_3.0_scaffold_669_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14253..15959
DNA (1707bp) protein (569aa)
nickel-dependent hydrogenase large subunit; K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=CG_Rhodof_02
Nickel-dependent hydrogenase, large subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R14_RHOFD rbh
nickel-dependent hydrogenase large subunit
cg2_3.0_scaffold_669_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15960..16499
DNA (540bp) protein (180aa)
peptidase M52, hydrogen uptake protein; K08567 hydrogenase 2 maturation protease [EC:3.4.24.-] Tax=CG_Rhodof_02
HybD peptidase. Aspartic peptidase. MEROPS family A31 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R13_RHOFD rbh
peptidase M52, hydrogen uptake protein
cg2_3.0_scaffold_669_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16512..16778
DNA (267bp) protein (89aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R12_RHOFD rbh
hydrogenase assembly chaperone hypC/hupF; K04653 hydrogenase expression/formation protein HypC Tax=CG_Rhodof_02
hydrogenase assembly chaperone hypC/hupF
cg2_3.0_scaffold_669_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16775..17314
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R11_RHOFD rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
cg2_3.0_scaffold_669_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18013
DNA (396bp) protein (132aa)
Hemerythrin-like metal-binding protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS99_ACCPU rbh
hemerythrin-like metal-binding protein Tax=CG_Rhodof_02
hemerythrin-like metal-binding protein
cg2_3.0_scaffold_669_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18035..18376
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=HYPA_RHOFD rbh
hydrogenase nickel insertion protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=CG_Rhodof_02
hydrogenase nickel insertion protein HypA
cg2_3.0_scaffold_669_c_20
unknown

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comp(18490..18807)
DNA (318bp) protein (106aa)

This feature has no annotations

cg2_3.0_scaffold_669_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18841..19602
DNA (762bp) protein (254aa)
Hydrogenase accessory protein HypB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R09_RHOFD rbh
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB Tax=CG_Rhodof_02
hydrogenase accessory protein HypB
cg2_3.0_scaffold_669_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19602..22049
DNA (2448bp) protein (816aa)
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R08_RHOFD rbh
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=CG_Rhodof_02
(NiFe) hydrogenase maturation protein HypF
cg2_3.0_scaffold_669_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22040..22282
DNA (243bp) protein (81aa)
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R07_RHOFD rbh
hydrogenase assembly chaperone hypC/hupF; K04653 hydrogenase expression/formation protein HypC Tax=CG_Rhodof_02
hydrogenase assembly chaperone hypC/hupF
cg2_3.0_scaffold_669_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22279..23460
DNA (1182bp) protein (394aa)
Hydrogenase expression/formation protein HypD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R06_RHOFD rbh
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=CG_Rhodof_02
hydrogenase expression/formation protein HypD
cg2_3.0_scaffold_669_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23466..25589
DNA (2124bp) protein (708aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL48_VARPS rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein rbh
cg2_3.0_scaffold_669_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


25643..26689
DNA (1047bp) protein (349aa)
Ribosomal protein L31 n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAF4_9BURK rbh
ribosomal protein L31 Tax=CG_Rhodof_02
ribosomal protein L31
cg2_3.0_scaffold_669_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26682..27746
DNA (1065bp) protein (355aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R05_RHOFD rbh
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=CG_Rhodof_02
hydrogenase expression/formation protein HypE
cg2_3.0_scaffold_669_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27759..29456
DNA (1698bp) protein (566aa)
Formyl transferase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R04_RHOFD rbh
formyl transferase-like protein Tax=CG_Rhodof_02
formyl transferase-like protein
Displaying items 1-30 of 43 in total

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