name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
cg2_3.0_scaffold_669_c_trna_1
unknown
|
Not on your lists |
137..207
|
transferRNA
|
|
cg2_3.0_scaffold_669_c_1
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
310..798
|
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48] Tax=CG_Rhodof_02
Protein tyrosine phosphatase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SY4_RHOFD
rbh
protein tyrosine phosphatase
|
|
cg2_3.0_scaffold_669_c_2
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
912..1217
|
Tax=CG_Rhodof_02
|
|
cg2_3.0_scaffold_669_c_trna_2
unknown
|
Not on your lists |
comp(1424..1497)
|
transferRNA
|
|
cg2_3.0_scaffold_669_c_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1631..2389
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUD7_9BURK
rbh
short-chain dehydrogenase/reductase SDR Tax=CG_Rhodof_02
short-chain dehydrogenase/reductase SDR
|
|
cg2_3.0_scaffold_669_c_4
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2433..4298
|
DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=CG_Rhodof_02
DNA primase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WC6_RHOFD
rbh
DNA primase
|
|
cg2_3.0_scaffold_669_c_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4543..6879
|
RNA polymerase sigma factor RpoD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Y63_RHOFD
rbh
sigma 70 (RpoD); K03086 RNA polymerase primary sigma factor Tax=CG_Rhodof_02
sigma 70 (RpoD)
|
|
cg2_3.0_scaffold_669_c_6
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6903..7427
|
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RPE4_ACCPU
rbh
ubiquinol-cytochrome c reductase, iron-sulfur subunit Tax=CG_Rhodof_02
ubiquinol-cytochrome c reductase, iron-sulfur subunit
|
|
cg2_3.0_scaffold_669_c_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7536..8606
|
cobalamin (vitamin B12) biosynthesis protein CbiM; K02007 cobalt/nickel transport system permease protein Tax=CG_Rhodof_02
cobalamin (vitamin B12) biosynthesis protein CbiM
|
|
cg2_3.0_scaffold_669_c_8
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8603..9412
|
Cobalt ABC transporter, inner membrane subunit CbiQ n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LH93_SYNFM
rbh
cobalt ABC transporter inner membrane subunit CbiQ; K02008 cobalt/nickel transport system permease protein Tax=CG_Rhodof_02
cobalt ABC transporter inner membrane subunit CbiQ
|
|
cg2_3.0_scaffold_669_c_9
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9409..10146
|
Cobalt ABC transporter, ATPase subunit n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RGH2_DESPD
rbh
cobalt ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein Tax=CG_Rhodof_02
cobalt ABC transporter ATPase
|
|
cg2_3.0_scaffold_669_c_10
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10164..10658)
|
Putative nickel-responsive regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B1P7_9PROT
rbh
nikR; putative transcriptional regulator with CopG/Arc/MetJ DNA-binding domain and metal-binding domain Tax=CG_Rhodof_02
nickel responsive regulator
|
|
cg2_3.0_scaffold_669_c_11
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10864..12045
|
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6); K06282 hydrogenase small subunit [EC:1.12.99.6] Tax=CG_Rhodof_02
hydrogenase (NiFe) small subunit HydA (EC:1.12.99.6)
Hydrogenase (NiFe) small subunit (HydA) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R17_RHOFD
rbh
|
|
cg2_3.0_scaffold_669_c_12
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12048..13043
|
Twin-arginine translocation pathway signal n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R16_RHOFD
rbh
hydrogenase 2 protein HybA Tax=CG_Rhodof_02
hydrogenase 2 protein HybA
|
|
cg2_3.0_scaffold_669_c_13
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13040..14206
|
Polysulphide reductase, NrfD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R15_RHOFD
rbh
putative hydrogenase 2 b cytochrome subunit Tax=CG_Rhodof_02
putative hydrogenase 2 b cytochrome subunit
|
|
cg2_3.0_scaffold_669_c_14
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14253..15959
|
nickel-dependent hydrogenase large subunit; K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=CG_Rhodof_02
Nickel-dependent hydrogenase, large subunit n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R14_RHOFD
rbh
nickel-dependent hydrogenase large subunit
|
|
cg2_3.0_scaffold_669_c_15
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15960..16499
|
peptidase M52, hydrogen uptake protein; K08567 hydrogenase 2 maturation protease [EC:3.4.24.-] Tax=CG_Rhodof_02
HybD peptidase. Aspartic peptidase. MEROPS family A31 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R13_RHOFD
rbh
peptidase M52, hydrogen uptake protein
|
|
cg2_3.0_scaffold_669_c_16
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16512..16778
|
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R12_RHOFD
rbh
hydrogenase assembly chaperone hypC/hupF; K04653 hydrogenase expression/formation protein HypC Tax=CG_Rhodof_02
hydrogenase assembly chaperone hypC/hupF
|
|
cg2_3.0_scaffold_669_c_17
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16775..17314
|
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R11_RHOFD
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
|
|
cg2_3.0_scaffold_669_c_18
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17618..18013
|
Hemerythrin-like metal-binding protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RS99_ACCPU
rbh
hemerythrin-like metal-binding protein Tax=CG_Rhodof_02
hemerythrin-like metal-binding protein
|
|
cg2_3.0_scaffold_669_c_19
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18035..18376
|
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=HYPA_RHOFD
rbh
hydrogenase nickel insertion protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=CG_Rhodof_02
hydrogenase nickel insertion protein HypA
|
|
cg2_3.0_scaffold_669_c_20
unknown
|
Not on your lists |
comp(18490..18807)
|
This feature has no annotations |
|
cg2_3.0_scaffold_669_c_21
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18841..19602
|
Hydrogenase accessory protein HypB n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R09_RHOFD
rbh
hydrogenase accessory protein HypB; K04652 hydrogenase nickel incorporation protein HypB Tax=CG_Rhodof_02
hydrogenase accessory protein HypB
|
|
cg2_3.0_scaffold_669_c_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19602..22049
|
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R08_RHOFD
rbh
(NiFe) hydrogenase maturation protein HypF; K04656 hydrogenase maturation protein HypF Tax=CG_Rhodof_02
(NiFe) hydrogenase maturation protein HypF
|
|
cg2_3.0_scaffold_669_c_23
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22040..22282
|
Hydrogenase assembly chaperone hypC/hupF n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R07_RHOFD
rbh
hydrogenase assembly chaperone hypC/hupF; K04653 hydrogenase expression/formation protein HypC Tax=CG_Rhodof_02
hydrogenase assembly chaperone hypC/hupF
|
|
cg2_3.0_scaffold_669_c_24
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22279..23460
|
Hydrogenase expression/formation protein HypD n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R06_RHOFD
rbh
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=CG_Rhodof_02
hydrogenase expression/formation protein HypD
|
|
cg2_3.0_scaffold_669_c_25
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23466..25589
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CL48_VARPS
rbh
hypothetical protein Tax=CG_Rhodof_02
hypothetical protein
rbh
|
|
cg2_3.0_scaffold_669_c_26
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25643..26689
|
Ribosomal protein L31 n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5NAF4_9BURK
rbh
ribosomal protein L31 Tax=CG_Rhodof_02
ribosomal protein L31
|
|
cg2_3.0_scaffold_669_c_27
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26682..27746
|
Hydrogenase expression/formation protein HypE n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R05_RHOFD
rbh
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=CG_Rhodof_02
hydrogenase expression/formation protein HypE
|
|
cg2_3.0_scaffold_669_c_28
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27759..29456
|
Formyl transferase-like n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21R04_RHOFD
rbh
formyl transferase-like protein Tax=CG_Rhodof_02
formyl transferase-like protein
|